Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   FZE25_RS04535 Genome accession   NZ_CP043416
Coordinates   863795..864586 (+) Length   263 a.a.
NCBI ID   WP_012117114.1    Uniprot ID   -
Organism   Bacillus velezensis strain ONU 553     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 858795..869586
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FZE25_RS04510 (FZE25_04440) - 860789..861673 (+) 885 WP_007408548.1 PhzF family phenazine biosynthesis isomerase -
  FZE25_RS04515 (FZE25_04445) - 861750..862334 (+) 585 WP_007408549.1 nitroreductase -
  FZE25_RS04520 (FZE25_04450) - 862374..862565 (-) 192 WP_007408550.1 YfhD family protein -
  FZE25_RS04525 (FZE25_04455) - 862636..862746 (-) 111 WP_003155504.1 YfhE family protein -
  FZE25_RS04530 (FZE25_04460) - 862804..863703 (-) 900 WP_076851429.1 TIGR01777 family oxidoreductase -
  FZE25_RS04535 (FZE25_04465) recX 863795..864586 (+) 792 WP_012117114.1 recombination regulator RecX Regulator
  FZE25_RS04540 (FZE25_04470) - 864593..864907 (+) 315 WP_007408553.1 YfhH family protein -
  FZE25_RS04545 (FZE25_04475) - 865052..866245 (+) 1194 WP_076982912.1 MFS transporter -
  FZE25_RS04550 (FZE25_04480) - 866285..866674 (-) 390 WP_149061631.1 DUF2606 family protein -
  FZE25_RS04555 (FZE25_04485) - 866637..867548 (-) 912 WP_032867735.1 trypsin-like serine peptidase -
  FZE25_RS04560 (FZE25_04490) - 867695..867847 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  FZE25_RS04565 (FZE25_04495) - 867971..868240 (+) 270 WP_003155492.1 YfhJ family protein -
  FZE25_RS04570 (FZE25_04500) - 868372..868899 (+) 528 WP_032867733.1 SH3 domain-containing protein -
  FZE25_RS04575 (FZE25_04505) - 868985..869320 (+) 336 WP_007408558.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 31004.21 Da        Isoelectric Point: 6.0921

>NTDB_id=383658 FZE25_RS04535 WP_012117114.1 863795..864586(+) (recX) [Bacillus velezensis strain ONU 553]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQYGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=383658 FZE25_RS04535 WP_012117114.1 863795..864586(+) (recX) [Bacillus velezensis strain ONU 553]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGTACGGCGATGATGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCTTACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACGCCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTGAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.468

100

0.795

Multiple sequence alignment