Detailed information NTG0383654

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: FZE25_RS01975
• Genome accession: NZ_CP043416
• Coordinates: 389413..390561 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain ONU 553
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 384413..395561

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FZE25_RS01955 (FZE25_01930)	-	384834..385517 (-)	684	WP_042634822.1	ABC transporter ATP-binding protein	-
FZE25_RS01960 (FZE25_01935)	-	385532..386944 (-)	1413	WP_149061571.1	ABC transporter permease	-
FZE25_RS01965 (FZE25_01940)	-	387157..387840 (+)	684	WP_007410267.1	response regulator transcription factor	-
FZE25_RS01970 (FZE25_01945)	-	387827..389260 (+)	1434	WP_161968256.1	sensor histidine kinase	-
FZE25_RS01975 (FZE25_01950)	rapC	389413..390561 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
FZE25_RS01980 (FZE25_01955)	phrC	390545..390664 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
FZE25_RS01985 (FZE25_01960)	-	390812..390922 (-)	111	WP_369878517.1	YjcZ family sporulation protein	-
FZE25_RS01990 (FZE25_01965)	-	391002..392366 (-)	1365	WP_042634827.1	aspartate kinase	-
FZE25_RS01995 (FZE25_01970)	ceuB	392780..393733 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
FZE25_RS02000 (FZE25_01975)	-	393723..394670 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
FZE25_RS02005 (FZE25_01980)	-	394664..395422 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=383654 FZE25_RS01975 WP_007410270.1 389413..390561(+) (rapC) [Bacillus velezensis strain ONU 553]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=383654 FZE25_RS01975 WP_007410270.1 389413..390561(+) (rapC) [Bacillus velezensis strain ONU 553]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568