Detailed information NTG0383601

Bioinformatically predicted

Overview

• Name: scnR
• Type: Regulator
• Locus tag: FY406_RS09250
• Genome accession: NZ_CP043405
• Coordinates: 1855127..1855816 (-)
• Length: 229 a.a.
• NCBI ID: WP_003088464.1
• Uniprot ID: -
• Organism: Streptococcus ratti strain ATCC 31377
• Function: regulate comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 1850127..1860816

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FY406_RS09220 (FY406_09220)	-	1850393..1851151 (-)	759	WP_003088451.1	inositol monophosphatase family protein	-
FY406_RS09225 (FY406_09225)	-	1851141..1851419 (-)	279	WP_003088453.1	UPF0223 family protein	-
FY406_RS09230 (FY406_09230)	-	1851412..1851825 (-)	414	WP_003088455.1	Spx/MgsR family RNA polymerase-binding regulatory protein	-
FY406_RS09235 (FY406_09235)	-	1851882..1852802 (-)	921	WP_003088457.1	bifunctional riboflavin kinase/FAD synthetase	-
FY406_RS09240 (FY406_09240)	truB	1852830..1853711 (-)	882	WP_003088460.1	tRNA pseudouridine(55) synthase TruB	-
FY406_RS09245 (FY406_09245)	scnK	1853816..1855126 (-)	1311	WP_003088462.1	sensor histidine kinase KdpD	Regulator
FY406_RS09250 (FY406_09250)	scnR	1855127..1855816 (-)	690	WP_003088464.1	response regulator transcription factor	Regulator
FY406_RS09255 (FY406_09255)	-	1855962..1856873 (+)	912	WP_003088467.1	ABC transporter ATP-binding protein	-
FY406_RS09260 (FY406_09260)	-	1856883..1857635 (+)	753	WP_003088478.1	ABC transporter permease	-
FY406_RS09265 (FY406_09265)	-	1857637..1858374 (+)	738	WP_003088480.1	ABC transporter permease	-
FY406_RS10555 (FY406_09270)	-	1858425..1858900 (+)	476	Protein_1779	hypothetical protein	-
FY406_RS09275 (FY406_09275)	-	1858968..1860332 (-)	1365	WP_003088485.1	DUF438 domain-containing protein	-
FY406_RS09280 (FY406_09280)	-	1860332..1860565 (-)	234	WP_003088487.1	DUF1858 domain-containing protein	-

Sequence

Protein

• Length: 229 a.a.
• Molecular weight: 26304.48 Da
• Isoelectric Point: 5.4493

>NTDB_id=383601 FY406_RS09250 WP_003088464.1 1855127..1855816(-) (scnR) [Streptococcus ratti strain ATCC 31377]
MKEKERKLLILDDNPEILDMITESLSIAGFSHLTRAASKKEALELLEREAFDLAILDIMLPDGSGFEVLREIRKTSAMPV
LFLSAVSDIEKQYQGFELGADDYIVKPFRPKELELRLLSILKRSYPPQDDVVQLDSCQIDFERAAILKEDQEIPLTAKEY
SLLKVLYNHKNKIVTFDQLLSKVWGDNYQGYENTLMAHIRKVRQKIEANPSKPVHLITIKGLGYQLRVD

Nucleotide

• Length: 690 bp

>NTDB_id=383601 FY406_RS09250 WP_003088464.1 1855127..1855816(-) (scnR) [Streptococcus ratti strain ATCC 31377]
ATGAAAGAAAAAGAGAGAAAACTACTCATCTTAGATGACAATCCTGAGATTTTAGACATGATCACAGAAAGTCTATCTAT
TGCTGGTTTCAGTCATTTGACACGGGCTGCCAGCAAAAAAGAAGCCCTAGAGCTTCTGGAAAGGGAAGCCTTTGACTTGG
CGATTTTGGATATTATGTTACCAGACGGCTCTGGTTTTGAGGTGCTGAGAGAAATTCGGAAGACCTCAGCCATGCCTGTG
CTCTTTCTGTCTGCGGTGTCTGACATTGAAAAACAATACCAAGGTTTCGAGCTGGGAGCGGATGACTACATCGTCAAACC
TTTTCGTCCTAAGGAACTAGAACTACGGCTCTTGTCCATTCTCAAGCGCAGCTATCCGCCGCAAGATGACGTGGTGCAAT
TAGATAGTTGTCAGATTGATTTTGAGCGCGCAGCCATTCTCAAAGAGGACCAAGAAATTCCGCTAACCGCTAAAGAATAC
AGCCTACTCAAGGTGCTATACAATCACAAAAATAAAATCGTCACCTTCGACCAGCTCTTGAGTAAGGTTTGGGGCGACAA
TTATCAAGGTTATGAAAATACGCTCATGGCTCATATCCGCAAGGTGCGGCAGAAGATAGAGGCTAATCCGTCTAAACCTG
TCCACCTCATTACTATTAAGGGGCTGGGCTACCAGCTGCGGGTGGATTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (9-116)

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (150-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
scnR	Streptococcus mutans UA159	76.316	99.563	0.76
micA	Streptococcus pneumoniae Cp1015	38.961	100	0.393
vicR	Streptococcus mutans UA159	36.207	100	0.367