Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   FX981_RS02480 Genome accession   NZ_CP043404
Coordinates   470356..471306 (-) Length   316 a.a.
NCBI ID   WP_149125796.1    Uniprot ID   -
Organism   Bacillus safensis strain PgKB20     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 465356..476306
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FX981_RS02450 (FX981_00494) - 465398..466015 (-) 618 WP_024425492.1 TVP38/TMEM64 family protein -
  FX981_RS02455 (FX981_00495) - 466172..466534 (+) 363 WP_034282166.1 hypothetical protein -
  FX981_RS02460 (FX981_00496) - 466606..467559 (-) 954 WP_149125794.1 LCP family protein -
  FX981_RS02465 (FX981_00497) - 467698..468642 (-) 945 WP_149125795.1 siderophore ABC transporter substrate-binding protein -
  FX981_RS02470 (FX981_00498) - 468664..469422 (-) 759 WP_024425488.1 ABC transporter ATP-binding protein -
  FX981_RS02475 (FX981_00499) - 469413..470363 (-) 951 WP_024425487.1 iron chelate uptake ABC transporter family permease subunit -
  FX981_RS02480 (FX981_00500) ceuB 470356..471306 (-) 951 WP_149125796.1 ABC transporter permease Machinery gene
  FX981_RS02485 (FX981_00501) - 471469..471747 (-) 279 WP_024425485.1 barstar family protein -
  FX981_RS02490 (FX981_00502) - 471813..472982 (-) 1170 WP_024425484.1 MFS transporter -
  FX981_RS02495 (FX981_00503) - 473128..474567 (+) 1440 WP_149125797.1 PLP-dependent aminotransferase family protein -
  FX981_RS02500 (FX981_00504) - 474598..475080 (-) 483 WP_024425482.1 hypothetical protein -
  FX981_RS02505 (FX981_00505) comK 475380..475958 (-) 579 WP_024425481.1 competence protein ComK Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34957.31 Da        Isoelectric Point: 9.7475

>NTDB_id=383490 FX981_RS02480 WP_149125796.1 470356..471306(-) (ceuB) [Bacillus safensis strain PgKB20]
MKLYQLSLFFVCLACISLFVGVQDLSILQLFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILVAMLVFTQANPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=383490 FX981_RS02480 WP_149125796.1 470356..471306(-) (ceuB) [Bacillus safensis strain PgKB20]
ATGAAATTGTATCAATTAAGTTTGTTTTTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTACAGCTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGTCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGTAGCAATGCTTGTTTTTACACAAGCGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATTAAGGTGAACGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGAGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCCGTTAACTTAGGTT
TAACGTATAAACGTGTGATGGCGGTTGGGTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGAATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTATCGATCTACCGCGGCGATCACTTGAAAAAAAGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GACTCATGGTAGGCATCATCGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(11-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.955

99.367

0.506

Multiple sequence alignment