Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | FX981_RS01090 | Genome accession | NZ_CP043404 |
| Coordinates | 204748..206850 (+) | Length | 700 a.a. |
| NCBI ID | WP_149125704.1 | Uniprot ID | - |
| Organism | Bacillus safensis strain PgKB20 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 199748..211850
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FX981_RS01060 (FX981_00208) | - | 200058..200420 (+) | 363 | WP_149125702.1 | winged helix-turn-helix transcriptional regulator | - |
| FX981_RS01065 (FX981_00209) | queF | 200851..201348 (-) | 498 | WP_024426839.1 | preQ(1) synthase | - |
| FX981_RS01070 (FX981_00210) | queE | 201364..202095 (-) | 732 | WP_056766298.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| FX981_RS01075 (FX981_00211) | queD | 202088..202528 (-) | 441 | WP_149125703.1 | 6-carboxytetrahydropterin synthase QueD | - |
| FX981_RS01080 (FX981_00212) | queC | 202529..203185 (-) | 657 | WP_024424683.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| FX981_RS01085 (FX981_00213) | - | 203460..204503 (-) | 1044 | WP_034623360.1 | membrane protein | - |
| FX981_RS01090 (FX981_00214) | clpC | 204748..206850 (+) | 2103 | WP_149125704.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| FX981_RS01095 (FX981_00216) | motA | 207229..208023 (+) | 795 | WP_024424680.1 | flagellar motor stator protein MotA | - |
| FX981_RS01100 (FX981_00217) | motB | 208016..208786 (+) | 771 | WP_024424679.1 | flagellar motor protein MotB | - |
| FX981_RS01105 (FX981_00218) | - | 208979..209434 (-) | 456 | WP_044331884.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| FX981_RS01110 (FX981_00219) | - | 209639..211144 (+) | 1506 | WP_044331882.1 | ATP-binding protein | - |
| FX981_RS01115 (FX981_00220) | - | 211191..211433 (-) | 243 | WP_024424676.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
Sequence
Protein
Download Length: 700 a.a. Molecular weight: 77996.57 Da Isoelectric Point: 4.9961
>NTDB_id=383480 FX981_RS01090 WP_149125704.1 204748..206850(+) (clpC) [Bacillus safensis strain PgKB20]
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSQAAGHAPNMEQPKQKGLLDELGRN
LTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTQDEAIDILKGIQDKYEAYHGVTYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLTEIAAEKQAALKEEQYEKAAKLRDEEEAIEARLQNKTTEKEHIVTAEDIQAIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVDKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGTADKTVKVGFQSDQEEAFEEQSLIDSLSSYFKPEFLNRFDSIIQFDSLDREDLVKIVDLLLNELSEQLKEQNLTVHVT
NEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEQLSGFTVDVEHDEIVVKKG
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSQAAGHAPNMEQPKQKGLLDELGRN
LTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTQDEAIDILKGIQDKYEAYHGVTYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLTEIAAEKQAALKEEQYEKAAKLRDEEEAIEARLQNKTTEKEHIVTAEDIQAIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVDKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGTADKTVKVGFQSDQEEAFEEQSLIDSLSSYFKPEFLNRFDSIIQFDSLDREDLVKIVDLLLNELSEQLKEQNLTVHVT
NEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEQLSGFTVDVEHDEIVVKKG
Nucleotide
Download Length: 2103 bp
>NTDB_id=383480 FX981_RS01090 WP_149125704.1 204748..206850(+) (clpC) [Bacillus safensis strain PgKB20]
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTAAATTCGTCCCGGAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAGCAGTCAAAAATGAAAATGGGACCTCAGCTCTTTGGAGGAAGTTCAT
TCTTCTCTCAGGCAGCAGGTCATGCCCCAAACATGGAGCAGCCAAAGCAAAAAGGCTTACTCGATGAGCTCGGCCGTAAC
TTAACAGATGGAGCAAATGCTGGTTTAATTGATCCAGTCATTGGCCGTGATGAAGAAGTCGCAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAATAACCCTGTTCTTATTGGTGAACCAGGTGTTGGGAAAACAGCGATCGCAGAAGGACTCGCGC
TCAAAATTGCGAGCGGCGATGTGCCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTTTCTTCACTTGTCGCA
AACACAGGTGTACGCGGTCAATTTGAGGAAAGAATGAAGCAGTTAATCAAAGAACTGCAAAGCCGTAAAAATATCATCTT
ATTTGTAGATGAAATCCACCTTCTTGTGGGCGCAGGATCTGCAGAAGGATCAATGGATGCTGGAAACATTTTAAAACCAG
CCCTTGCAAGAGGTGAACTGCAGCTAGTAGGTGCGACGACATTAAAAGAATATCGCCAAATTGAAAAAGATGCTGCACTC
GAACGGCGCTTCCAGCCCGTCATCGTAGATGAGCCAACACAAGATGAAGCGATCGACATCTTAAAAGGCATTCAAGATAA
ATACGAGGCCTATCATGGTGTCACCTATTCAGATGAAGCAATCAAAGCGTGTGTTCAATTATCTTCGCGGTATATTCAAG
ACCGTCATTTACCGGATAAAGCCATTGATTTAATGGATGAAGCTGGTTCAAAAGCGAACCTCTCCATTGATGCAGCAAGT
GAAGATGAGCTGACAAATCGATTAACGGAAATTGCCGCAGAAAAACAAGCTGCGCTAAAAGAAGAACAATATGAAAAAGC
AGCGAAGCTTCGCGATGAAGAAGAAGCCATTGAAGCAAGACTTCAAAACAAAACAACTGAAAAAGAGCATATCGTTACAG
CAGAGGACATTCAGGCCATTGTGGAACAAAAAACAGGCATTCCTGTCGGGAAACTCCAAGCAGACGAACAAACCAAAATG
AAAGAAATTGACGTCCGTCTAAAAGCACGAGTGATTGGGCAGGAGCATGCGGTTGATAAAGTGGCCAAAGCCGTGAAAAG
AAGCAGAGCTGGATTAAAATCGAAACATAGACCAACAGGCTCCTTCCTTTTCGTTGGACCAACAGGTGTCGGGAAAACCG
AATTGTCTAAAACGTTAGCTGAAGAATTATTCGGTTCAAGAGATGCGATCATTCGTTTAGATATGAGTGAGTACATGGAA
AAACACTCTGTGTCCAAACTCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCTGGCCAGCTGACTGAAAAAGT
GCGCAGAAAACCATACAGCATCATTTTGCTGGATGAAATCGAAAAAGCACACCCAGATGTACAGCACATGTTCCTGCAAA
TCATGGAAGACGGCCGCTTAACAGACAGCCAAGGCAGAACGGTCAGCTTTAAAGATACAGTCATCATCATGACAAGTAAC
GCAGGCACCGCAGATAAAACAGTCAAAGTGGGCTTCCAATCTGATCAGGAAGAAGCGTTTGAGGAACAATCACTCATTGA
TTCACTGAGCAGCTACTTCAAACCAGAATTTTTGAACCGTTTTGACAGCATCATTCAATTTGATTCACTAGACAGAGAGG
ATTTAGTGAAGATTGTTGATCTTCTGCTCAATGAGCTGTCAGAGCAATTAAAAGAGCAGAATTTAACAGTTCATGTCACA
AATGAAGCAAAAGAAAAGATTGCAGAGCTTGGATATCATCCTGCATTTGGTGCTCGTCCACTTCGAAGAACCATCCAAGA
GCACGTTGAAGACCAAATGACGGAGATCCTGCTTGAAGAGGAGCAGCTTTCTGGATTTACTGTGGATGTTGAACATGACG
AAATCGTCGTAAAAAAAGGATAA
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTAAATTCGTCCCGGAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAGCAGTCAAAAATGAAAATGGGACCTCAGCTCTTTGGAGGAAGTTCAT
TCTTCTCTCAGGCAGCAGGTCATGCCCCAAACATGGAGCAGCCAAAGCAAAAAGGCTTACTCGATGAGCTCGGCCGTAAC
TTAACAGATGGAGCAAATGCTGGTTTAATTGATCCAGTCATTGGCCGTGATGAAGAAGTCGCAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAATAACCCTGTTCTTATTGGTGAACCAGGTGTTGGGAAAACAGCGATCGCAGAAGGACTCGCGC
TCAAAATTGCGAGCGGCGATGTGCCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTTTCTTCACTTGTCGCA
AACACAGGTGTACGCGGTCAATTTGAGGAAAGAATGAAGCAGTTAATCAAAGAACTGCAAAGCCGTAAAAATATCATCTT
ATTTGTAGATGAAATCCACCTTCTTGTGGGCGCAGGATCTGCAGAAGGATCAATGGATGCTGGAAACATTTTAAAACCAG
CCCTTGCAAGAGGTGAACTGCAGCTAGTAGGTGCGACGACATTAAAAGAATATCGCCAAATTGAAAAAGATGCTGCACTC
GAACGGCGCTTCCAGCCCGTCATCGTAGATGAGCCAACACAAGATGAAGCGATCGACATCTTAAAAGGCATTCAAGATAA
ATACGAGGCCTATCATGGTGTCACCTATTCAGATGAAGCAATCAAAGCGTGTGTTCAATTATCTTCGCGGTATATTCAAG
ACCGTCATTTACCGGATAAAGCCATTGATTTAATGGATGAAGCTGGTTCAAAAGCGAACCTCTCCATTGATGCAGCAAGT
GAAGATGAGCTGACAAATCGATTAACGGAAATTGCCGCAGAAAAACAAGCTGCGCTAAAAGAAGAACAATATGAAAAAGC
AGCGAAGCTTCGCGATGAAGAAGAAGCCATTGAAGCAAGACTTCAAAACAAAACAACTGAAAAAGAGCATATCGTTACAG
CAGAGGACATTCAGGCCATTGTGGAACAAAAAACAGGCATTCCTGTCGGGAAACTCCAAGCAGACGAACAAACCAAAATG
AAAGAAATTGACGTCCGTCTAAAAGCACGAGTGATTGGGCAGGAGCATGCGGTTGATAAAGTGGCCAAAGCCGTGAAAAG
AAGCAGAGCTGGATTAAAATCGAAACATAGACCAACAGGCTCCTTCCTTTTCGTTGGACCAACAGGTGTCGGGAAAACCG
AATTGTCTAAAACGTTAGCTGAAGAATTATTCGGTTCAAGAGATGCGATCATTCGTTTAGATATGAGTGAGTACATGGAA
AAACACTCTGTGTCCAAACTCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCTGGCCAGCTGACTGAAAAAGT
GCGCAGAAAACCATACAGCATCATTTTGCTGGATGAAATCGAAAAAGCACACCCAGATGTACAGCACATGTTCCTGCAAA
TCATGGAAGACGGCCGCTTAACAGACAGCCAAGGCAGAACGGTCAGCTTTAAAGATACAGTCATCATCATGACAAGTAAC
GCAGGCACCGCAGATAAAACAGTCAAAGTGGGCTTCCAATCTGATCAGGAAGAAGCGTTTGAGGAACAATCACTCATTGA
TTCACTGAGCAGCTACTTCAAACCAGAATTTTTGAACCGTTTTGACAGCATCATTCAATTTGATTCACTAGACAGAGAGG
ATTTAGTGAAGATTGTTGATCTTCTGCTCAATGAGCTGTCAGAGCAATTAAAAGAGCAGAATTTAACAGTTCATGTCACA
AATGAAGCAAAAGAAAAGATTGCAGAGCTTGGATATCATCCTGCATTTGGTGCTCGTCCACTTCGAAGAACCATCCAAGA
GCACGTTGAAGACCAAATGACGGAGATCCTGCTTGAAGAGGAGCAGCTTTCTGGATTTACTGTGGATGTTGAACATGACG
AAATCGTCGTAAAAAAAGGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. cremoris KW2 |
57.046 |
100 |
0.601 |
| clpE | Streptococcus mutans UA159 |
56.469 |
100 |
0.599 |
| clpE | Streptococcus pneumoniae Rx1 |
55.663 |
100 |
0.576 |
| clpE | Streptococcus pneumoniae D39 |
55.663 |
100 |
0.576 |
| clpE | Streptococcus pneumoniae R6 |
55.663 |
100 |
0.576 |
| clpE | Streptococcus pneumoniae TIGR4 |
55.663 |
100 |
0.576 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
53.881 |
95.714 |
0.516 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.086 |
93.143 |
0.439 |
| clpC | Streptococcus thermophilus LMD-9 |
46.368 |
92.429 |
0.429 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.213 |
92.429 |
0.427 |
| clpC | Streptococcus mutans UA159 |
44.172 |
93.143 |
0.411 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.904 |
89.714 |
0.403 |
| clpC | Streptococcus pneumoniae Rx1 |
45.104 |
89 |
0.401 |
| clpC | Streptococcus pneumoniae D39 |
45.104 |
89 |
0.401 |