Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   FX981_RS00705 Genome accession   NZ_CP043404
Coordinates   135875..136447 (-) Length   190 a.a.
NCBI ID   WP_025092353.1    Uniprot ID   A0A5C0WCR7
Organism   Bacillus safensis strain PgKB20     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 130875..141447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FX981_RS00675 (FX981_00133) - 130915..131406 (-) 492 WP_024424732.1 molybdenum cofactor biosynthesis protein MoaE -
  FX981_RS00680 (FX981_00134) mobB 131403..131927 (-) 525 WP_024424784.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  FX981_RS00685 (FX981_00135) glp 131909..133186 (-) 1278 WP_187470533.1 gephyrin-like molybdotransferase Glp -
  FX981_RS00690 (FX981_00136) - 133196..134212 (-) 1017 WP_044335906.1 thiazole biosynthesis adenylyltransferase ThiF -
  FX981_RS00695 (FX981_00137) - 134243..134824 (-) 582 WP_041117250.1 molybdenum cofactor guanylyltransferase -
  FX981_RS00700 (FX981_00138) - 134910..135827 (+) 918 WP_034623329.1 hypothetical protein -
  FX981_RS00705 (FX981_00139) rok 135875..136447 (-) 573 WP_025092353.1 transcriptional regulator Rok Regulator
  FX981_RS00710 (FX981_00140) - 136928..137386 (-) 459 WP_024424727.1 TlpA family protein disulfide reductase -
  FX981_RS00715 (FX981_00141) ahpA 137469..138011 (-) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  FX981_RS00720 (FX981_00142) - 138284..139093 (+) 810 WP_024424726.1 mechanosensitive ion channel family protein -
  FX981_RS00725 (FX981_00143) - 139116..139358 (-) 243 WP_024424725.1 YkuS family protein -
  FX981_RS00730 (FX981_00144) - 139409..140539 (-) 1131 WP_044331971.1 N-acetyldiaminopimelate deacetylase -
  FX981_RS00735 (FX981_00145) dapD 140622..141332 (-) 711 WP_008347987.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21547.49 Da        Isoelectric Point: 9.7309

>NTDB_id=383478 FX981_RS00705 WP_025092353.1 135875..136447(-) (rok) [Bacillus safensis strain PgKB20]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQTQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=383478 FX981_RS00705 WP_025092353.1 135875..136447(-) (rok) [Bacillus safensis strain PgKB20]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAGACGGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAAACACAATCATCATCTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCTAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAACGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5C0WCR7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8

Multiple sequence alignment