Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicX   Type   Regulator
Locus tag   HF584_RS08755 Genome accession   NZ_CP051165
Coordinates   1826717..1827517 (-) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain NGA84b     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1821717..1832517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HF584_RS08740 (HF584_13840) - 1822750..1823310 (-) 561 WP_054189802.1 hypothetical protein -
  HF584_RS08745 (HF584_00130) rlmH 1823338..1823817 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  HF584_RS08750 (HF584_00125) adsA 1824185..1826491 (-) 2307 WP_054189800.1 LPXTG-anchored adenosine synthase AdsA -
  HF584_RS08755 (HF584_00120) vicX 1826717..1827517 (-) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  HF584_RS08760 (HF584_00115) yycI 1827906..1828694 (-) 789 WP_054189799.1 two-component system regulatory protein YycI -
  HF584_RS08765 (HF584_00110) yycH 1828695..1830029 (-) 1335 WP_054189798.1 two-component system activity regulator YycH -
  HF584_RS08770 (HF584_00105) walK 1830022..1831848 (-) 1827 WP_054189797.1 cell wall metabolism sensor histidine kinase WalK -

Sequence


Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=382897 HF584_RS08755 WP_000088649.1 1826717..1827517(-) (vicX) [Staphylococcus aureus strain NGA84b]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=382897 HF584_RS08755 WP_000088649.1 1826717..1827517(-) (vicX) [Staphylococcus aureus strain NGA84b]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TTTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGCAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTACCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGTGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474


Multiple sequence alignment