Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   FY206_RS09020 Genome accession   NZ_CP043318
Coordinates   1848112..1848738 (+) Length   208 a.a.
NCBI ID   WP_032639334.1    Uniprot ID   -
Organism   Enterobacter chengduensis strain WCHECl-C4 = WCHECh050004     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1843112..1853738
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FY206_RS09000 (FY206_09000) - 1843511..1845271 (-) 1761 WP_032639324.1 Lon protease family protein -
  FY206_RS09005 (FY206_09005) matP 1845458..1845910 (+) 453 WP_032639326.1 macrodomain Ter protein MatP -
  FY206_RS09010 (FY206_09010) ompA 1845975..1847030 (-) 1056 WP_120286683.1 porin OmpA -
  FY206_RS09015 (FY206_09015) sulA 1847385..1847894 (-) 510 WP_032639331.1 SOS-induced cell division inhibitor SulA -
  FY206_RS09020 (FY206_09020) sxy/tfoX 1848112..1848738 (+) 627 WP_032639334.1 TfoX/Sxy family DNA transformation protein Regulator
  FY206_RS09025 (FY206_09025) yccS 1848695..1850857 (-) 2163 WP_077064056.1 YccS family putative transporter -
  FY206_RS09030 (FY206_09030) - 1850877..1851323 (-) 447 WP_032639339.1 YccF domain-containing protein -
  FY206_RS09035 (FY206_09035) helD 1851447..1853501 (+) 2055 WP_077064055.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23946.53 Da        Isoelectric Point: 9.4215

>NTDB_id=382830 FY206_RS09020 WP_032639334.1 1848112..1848738(+) (sxy/tfoX) [Enterobacter chengduensis strain WCHECl-C4 = WCHECh050004]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQIEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENYSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=382830 FY206_RS09020 WP_032639334.1 1848112..1848738(+) (sxy/tfoX) [Enterobacter chengduensis strain WCHECl-C4 = WCHECh050004]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTTTCACCACTTGGCGAGATCCATCATCGCGCGCT
GTTTGGAGGCTACACCCTGGCGGTGGATGATGCCGTCTTTGCCATGGTGTCTGATGGCGAACTTTATCTTCGGGCCTGTG
AGGAGAGTGCAAAATACTGTGTCAAAAATGCCTCTTCATTTTTAACGCTGATGAAGCGAGGCCGCCCGGTGCTGCTTAAC
TATTACCGCGTGGATGAGGGATTATGGCAGGACAGGGAGCGGTTGCTCCAGCTCTCTTCCTTTGCGCTCAGCGCGGCAAG
AAAAGAGCGCTATCAGCGCCATCAGCGTAACCGACTAAAAGATCTGCCAAACCTGACCTTTCAGATTGAGGTCTTGCTCT
TTGAAGCAGGCATCACCAATGAAGAAACGCTGCGGGCGCTGGGGGCCAGAGCGAGCTGGCTAAAGATGCGGGCAAAAAAT
AAAGCGCTCAGCATCAAGGTTCTCTTTGCGCTTGAGGGGGCAATCGAAGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAACTACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567

Multiple sequence alignment