Detailed information NTG0382783

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: FYN22_RS15170
• Genome accession: NZ_CP043307
• Coordinates: 3124411..3125775 (+)
• Length: 454 a.a.
• NCBI ID: WP_410487276.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain Acsw19
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 3119411..3130775

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FYN22_RS15150 (FYN22_15150)	thrC	3119617..3120756 (+)	1140	WP_004692833.1	threonine synthase	-
FYN22_RS15155 (FYN22_15155)	-	3120842..3121897 (-)	1056	WP_005400997.1	serine hydrolase	-
FYN22_RS15160 (FYN22_15160)	-	3122113..3122748 (+)	636	WP_010325697.1	response regulator	-
FYN22_RS15165 (FYN22_15165)	pilS	3122770..3124338 (+)	1569	WP_148826905.1	sensor histidine kinase	Regulator
FYN22_RS15170 (FYN22_15170)	pilR	3124411..3125775 (+)	1365	WP_410487276.1	sigma-54-dependent transcriptional regulator	Regulator
FYN22_RS15175 (FYN22_15175)	-	3125780..3126889 (-)	1110	WP_410487277.1	S41 family peptidase	-
FYN22_RS15180 (FYN22_15180)	gpmI	3126974..3128521 (-)	1548	WP_062033296.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
FYN22_RS15185 (FYN22_15185)	lptG	3128645..3129715 (-)	1071	WP_148826908.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 51082.81 Da
• Isoelectric Point: 6.8692

>NTDB_id=382783 FYN22_RS15170 WP_410487276.1 3124411..3125775(+) (pilR) [Acinetobacter johnsonii strain Acsw19]
MQMSLSRMGIDTHIAYRLQEAVQALKTHQYDACLTDLNLPDGNGLSLVDFIAQNYPNLPVAVLTAYGNMDIAIAALKAGA
FDFVSKPINQKHLEQLLQKAFNQPINQLHIQEDTLEHRLLIGQSLPIQQLRITLKKIARSQAPVFITGESGTGKEVVANL
VHRLSNRNEGPFIAINCGAIPTELMESELFGHRKGSFTGATQDKQGLILSAHGGSLFLDEIAELPLTMQVKLLRAVQEKR
IRPIGSDTEIDVDFRVISASHQDLEALVQQGKFRQDLYFRIHVMDIVLPALRERGNDIILLAQHFIQKICQEWDIPVKPL
SERAREFLLAQYYPGNVRELRNMMERAITLSDESSIDLPHLQTAPLRPIAQTNYANATQQVPVGNDQLGHVPSRKLPEEG
LELYLEKIEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDGEDDSV

Nucleotide

• Length: 1365 bp

>NTDB_id=382783 FYN22_RS15170 WP_410487276.1 3124411..3125775(+) (pilR) [Acinetobacter johnsonii strain Acsw19]
ATGCAAATGTCTTTAAGTCGGATGGGGATTGATACACATATTGCCTATCGCTTACAAGAGGCGGTTCAAGCCCTGAAAAC
GCATCAATATGATGCCTGTCTAACCGATCTTAATTTACCCGATGGTAATGGCCTGAGCTTGGTCGATTTTATTGCTCAAA
ATTATCCTAATTTGCCCGTTGCAGTGCTGACTGCTTACGGCAACATGGATATTGCGATTGCAGCACTTAAAGCTGGTGCT
TTTGATTTTGTCAGCAAACCGATCAACCAAAAACATTTAGAGCAACTTTTACAAAAAGCCTTTAATCAACCCATCAATCA
GCTGCATATCCAAGAAGATACGCTTGAACATCGTCTGCTGATTGGTCAGTCCCTTCCTATTCAACAGCTACGCATCACCT
TAAAGAAAATTGCACGCTCGCAAGCCCCTGTCTTTATTACGGGTGAATCAGGTACTGGCAAAGAAGTGGTGGCGAATCTG
GTACATCGCCTGAGTAATCGTAATGAAGGGCCATTTATTGCCATTAACTGCGGTGCGATACCGACTGAACTGATGGAAAG
TGAATTGTTTGGGCACCGTAAGGGTAGCTTTACAGGAGCGACTCAAGACAAACAAGGATTGATTCTGTCTGCGCATGGCG
GTAGTTTATTTTTAGATGAAATTGCTGAGTTACCGCTCACTATGCAGGTGAAACTGCTGCGCGCGGTACAAGAAAAACGC
ATTCGCCCAATTGGGAGTGACACCGAAATTGATGTCGATTTCCGTGTGATTAGTGCCAGCCATCAAGACTTAGAAGCACT
GGTGCAACAAGGCAAGTTCCGTCAGGATTTATACTTCCGCATCCATGTCATGGACATTGTACTGCCTGCTCTACGTGAGC
GTGGCAATGACATTATTCTTTTAGCACAACATTTCATTCAGAAAATCTGTCAAGAATGGGACATCCCAGTCAAACCATTG
AGTGAACGTGCACGTGAATTTTTATTGGCTCAATATTATCCAGGCAATGTACGTGAACTACGCAATATGATGGAACGTGC
CATCACTTTAAGTGATGAAAGCAGTATCGACTTACCCCACTTACAAACAGCCCCATTGCGACCCATTGCTCAGACTAACT
ATGCCAATGCCACCCAACAAGTTCCTGTTGGCAATGATCAACTCGGTCATGTGCCTTCACGTAAATTGCCCGAAGAGGGT
TTAGAGCTGTATTTAGAAAAAATTGAAAAAGAAATTTTGATGAATGCGCTCAACCTCACCCACTGGAACCGCACTCTGGC
GGCTAAAAAGCTCGGCATGTCTTTCCGTTCTTTACGTTATCGCTTGAAAAAATTTGGGTTAGATGGCGAAGACGATTCCG
TTTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (4-97)

• Sigma-54 interaction domain (Sigma54_activat) (120-286)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.67	100	0.747
pilR	Pseudomonas aeruginosa PAK	49.002	99.339	0.487