Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   FYN22_RS11485 Genome accession   NZ_CP043307
Coordinates   2351359..2355858 (-) Length   1499 a.a.
NCBI ID   WP_148826489.1    Uniprot ID   -
Organism   Acinetobacter johnsonii strain Acsw19     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2346359..2360858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FYN22_RS11455 (FYN22_11455) elsL 2347407..2347910 (-) 504 WP_148826484.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  FYN22_RS11460 (FYN22_11460) - 2347910..2348302 (-) 393 WP_148826485.1 YbaN family protein -
  FYN22_RS11465 (FYN22_11465) - 2348400..2349278 (+) 879 WP_148826486.1 DUF1853 family protein -
  FYN22_RS11470 (FYN22_11470) - 2349435..2349581 (+) 147 WP_126035781.1 entericidin A/B family lipoprotein -
  FYN22_RS11475 (FYN22_11475) dapE 2349698..2350831 (+) 1134 WP_148826487.1 succinyl-diaminopimelate desuccinylase -
  FYN22_RS11480 (FYN22_11480) - 2350893..2351354 (-) 462 WP_148826488.1 hypothetical protein -
  FYN22_RS11485 (FYN22_11485) chpA 2351359..2355858 (-) 4500 WP_148826489.1 Hpt domain-containing protein Regulator
  FYN22_RS11490 (FYN22_11490) - 2356024..2358096 (-) 2073 WP_005399922.1 methyl-accepting chemotaxis protein -
  FYN22_RS11495 (FYN22_11495) - 2358147..2358683 (-) 537 WP_004694490.1 chemotaxis protein CheW -
  FYN22_RS11500 (FYN22_11500) - 2358689..2359057 (-) 369 WP_004694491.1 response regulator -
  FYN22_RS11505 (FYN22_11505) pilG 2359085..2359468 (-) 384 WP_004694493.1 twitching motility response regulator PilG Regulator
  FYN22_RS11510 (FYN22_11510) - 2359749..2360387 (+) 639 WP_087010454.1 hypothetical protein -

Sequence


Protein


Download         Length: 1499 a.a.        Molecular weight: 167378.12 Da        Isoelectric Point: 4.4030

>NTDB_id=382768 FYN22_RS11485 WP_148826489.1 2351359..2355858(-) (chpA) [Acinetobacter johnsonii strain Acsw19]
MKEILKHLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELDPLFEKWYAEPTHQETLLSIRRHFHTLKGSGRMVGAKSA
GETAWGVEDTLNRVISGAVPLTATVQKFAKTVFKLYQFKLYPTFKAVQEIDLDLRPLVLIGQQLQQNQSLEPALEELLQL
SNHLNSNDVVTGLELSDIEVAESEPQVADVSEQDDQVHDVLKETLAIFIEEAEDHLATIDQFLNADETKVQDYNGLIRAL
HTLRGSSSMAQIEHVFNASSKVENLFKTLVQEEIVSTSKEISLLTQYAEFVRDYLHVLGRGTNEQLDVIYATFTTAWDNY
GFSIEDVDDELNPQGMVSKLIELNIDLLLDAEFEFDQRAKVEYPDYIQHLGEQAKQLLEFTNNRAAQGIHDFTSELYAGY
QALLKKPELLNVDYAYELFGQAHQEFIHLFDTLAAGQRVILTEEVHKVLNELMAFVQQDVESTSTTVIELVAEAIVSGNT
LQPSLDLAQISQQIASDHQYKQSNTANTDFDDDLLDIFLEEAEELLMGMDQDLNTWSKNGNDTAALNNLMRYLHTLKGGA
NMISAPFIGSIAHELESIYERVIRQQIATTPQLISIIRLVQDDVADRIQVIRTEKVDYPATATIKVLHNIQSLVEGTTLT
ASASEPLVEAFVKAIEEAQPSVQEPLSNVDSIIEVEITAVESATAIEASSVVENTDVTVIEQLDTPSLVQEEAVSAVEEA
ASLLSIVEETFLEEAEEILATTDGLLKQWTEQRSDRSVLLQLQRAAHSLKGGARMAENEPVGAIAYELETTFEQFAVHNF
SSNVYDPLLQTAFEWLKQAIFKRDFSNYDGLKNSLASIDYVDVIAQLPTRVTQIDLLNAVPSFEFVQGDGTEPPAMLGEW
KETTHLDGGNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSE
NSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQ
RIVRQTASTLNRPTELVVHNTEGELDRTILERLVTPFEHMLRNAIDHGIEDTEQRSAAKKSATGQIELNISRQGTDVIVS
FKDDGKGIDESTIKAKALNLGLIKADQVLDKQEILQFIFHPGFSTAKEVTQISGRGVGLDVVQSEIKALGGHVTVESEIG
FGTTFIIRVPTTVAVSDALMVKAGDQQYAIPLAQIDRIVRIAPTALDQYFHSKDDQFKIDGVSYKLRYLSEFLSNQPIPR
LSNIGHSLPVLLIKGNSGQTIALLVDQLIGSRAQIVVKPVGQQFASIGAIAGATILGDGHVCLILDGQNIARQILSTKRV
THAADHRDFGRHQDTRRLVMIVDDSVTVRKVTSRLLERQGFDIVTAKDGVDAMEQLESVKPDLMLLDIEMPRMDGFEVTN
LVRHHEIHQNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLLAEKQG

Nucleotide


Download         Length: 4500 bp        

>NTDB_id=382768 FYN22_RS11485 WP_148826489.1 2351359..2355858(-) (chpA) [Acinetobacter johnsonii strain Acsw19]
ATGAAAGAAATATTAAAACATTTAGTTGAAACTACAACGCTTCCGGAAGATAGTTATCTAGATCAAGATGCAGAAATTCT
TGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGTTAGATCCATTATTTGAAAAGTGGTACGCTGAACCGACCC
ATCAAGAAACCTTGTTGAGCATACGTCGTCACTTCCATACCTTAAAAGGCTCTGGTCGTATGGTAGGGGCAAAGTCAGCA
GGTGAAACAGCATGGGGGGTTGAAGATACCTTAAATCGTGTGATTTCAGGAGCTGTACCGCTCACAGCAACGGTTCAAAA
ATTTGCTAAGACAGTATTTAAACTGTATCAATTTAAACTGTATCCGACTTTTAAAGCGGTGCAGGAAATTGATCTTGATC
TTCGTCCATTGGTTTTAATTGGACAACAATTACAACAAAATCAAAGTTTAGAACCTGCTCTAGAAGAGTTGCTACAACTG
TCTAATCATCTAAATAGTAATGATGTCGTGACGGGATTAGAGCTGAGCGATATCGAAGTGGCTGAATCTGAGCCACAAGT
TGCAGACGTTTCTGAGCAGGATGATCAAGTGCATGATGTCCTTAAAGAAACTTTAGCGATCTTCATTGAAGAAGCCGAAG
ACCATTTAGCGACTATCGATCAGTTCTTAAATGCAGATGAAACCAAAGTACAAGATTACAATGGCTTAATCCGTGCTTTA
CATACATTGCGCGGTAGTTCGTCTATGGCGCAAATTGAGCATGTTTTTAATGCCAGCTCAAAAGTCGAAAATCTATTTAA
AACCTTGGTTCAAGAAGAGATCGTTTCTACTTCGAAGGAGATCTCTTTACTCACCCAATATGCTGAATTTGTGCGTGATT
ATTTACATGTGCTTGGGCGTGGTACGAACGAACAGCTTGATGTGATTTATGCTACGTTCACTACGGCTTGGGATAACTAT
GGTTTCAGTATAGAAGACGTAGACGATGAACTGAACCCACAAGGTATGGTCTCGAAGCTGATCGAGTTAAATATTGATCT
GTTGCTTGATGCCGAGTTTGAGTTTGATCAGCGTGCTAAGGTTGAATATCCAGACTATATTCAGCACTTAGGTGAACAAG
CAAAACAATTGCTAGAATTTACCAATAACCGTGCTGCTCAAGGAATTCATGACTTTACTTCTGAGCTATATGCTGGTTAT
CAAGCCTTACTGAAAAAGCCAGAATTACTCAATGTAGATTATGCATACGAGTTATTTGGTCAGGCACATCAAGAATTTAT
CCATTTATTTGACACTTTAGCTGCGGGTCAGCGCGTCATTCTGACTGAAGAAGTGCATAAAGTTTTGAATGAATTAATGG
CCTTCGTACAGCAAGATGTTGAATCGACTTCGACGACGGTAATTGAACTTGTTGCTGAGGCTATTGTTTCTGGAAATACT
TTACAACCAAGTCTTGATCTTGCACAGATTTCGCAGCAAATTGCATCGGATCATCAGTACAAGCAATCGAATACAGCCAA
TACCGATTTTGATGATGATTTGCTTGATATCTTCTTGGAAGAAGCCGAAGAATTATTGATGGGGATGGATCAGGATCTCA
ATACTTGGTCTAAAAATGGCAATGATACCGCAGCGCTCAATAATTTAATGCGTTATTTGCACACCTTAAAAGGTGGTGCA
AATATGATTTCTGCACCTTTTATTGGTTCGATTGCACACGAATTAGAGTCTATTTATGAGCGTGTGATTCGTCAGCAAAT
AGCCACAACGCCACAGTTGATCAGCATCATTCGCTTAGTACAGGATGACGTCGCAGACCGAATTCAGGTCATTCGTACGG
AGAAGGTTGATTACCCAGCAACAGCGACCATTAAGGTATTGCATAACATTCAGAGCTTGGTTGAGGGTACGACTCTTACC
GCTTCAGCATCTGAGCCTTTGGTTGAGGCGTTTGTTAAAGCAATTGAAGAGGCTCAGCCTTCAGTTCAAGAACCTTTATC
TAATGTAGATAGCATAATTGAAGTTGAAATAACTGCTGTTGAGTCAGCAACTGCAATTGAAGCGTCGAGTGTAGTTGAAA
ACACTGATGTTACTGTCATTGAACAGCTGGATACTCCGTCACTTGTCCAAGAAGAAGCAGTCAGCGCTGTTGAAGAAGCA
GCTAGTCTTTTATCAATTGTTGAAGAAACTTTCTTGGAAGAAGCTGAAGAAATTTTAGCGACTACGGATGGCTTACTGAA
ACAGTGGACTGAACAGCGTAGTGACCGTAGTGTGTTACTGCAATTGCAACGTGCCGCGCACAGTTTAAAAGGCGGCGCAC
GTATGGCGGAGAATGAACCCGTTGGTGCGATTGCTTATGAGCTAGAAACCACATTTGAGCAATTTGCTGTACATAATTTC
AGTTCAAACGTGTATGACCCATTATTGCAAACCGCATTTGAATGGTTAAAACAAGCCATCTTCAAACGTGATTTTAGTAA
TTATGATGGTCTGAAAAATAGCTTAGCATCTATTGATTATGTGGATGTGATTGCGCAATTACCTACGCGTGTAACTCAAA
TTGATTTACTCAATGCTGTACCAAGTTTTGAGTTTGTGCAGGGTGATGGTACTGAGCCACCAGCAATGCTGGGTGAGTGG
AAAGAAACGACTCACTTGGATGGTGGTAATGAGATGATCCGTATCTCAGCTGATTTGGTTGAAAAAATGATCGACCTATC
AGGTGAAAATGCAATTAACCGTTCACGTATTGAGATGGATTTAGGTCAACTCGGCAATACTTTGAACGAGATGGAGCTTG
CAATTAAGCGTTTGGCGGATCAGTTACGTCGAATGGAGGGTGAGCTTGAGAGTCAAATTATTGCAAAGCACGGTTCTGAA
AACTCGCGCTACGCAGACTTTGATCCCTTGGAAATGGACCAATATTCATCGCTGAATCAATTGTCTAAATCCTTAGCCGA
ATCAGCTTCGGATTTGGTCGACTTCAAGAGCACTTTGGCTGAGAAAATTCGTGATGCGGAAGGCTTGTTATTACAACAAT
CCCGTATTCAAGCGGAGATTCAAGAAAGCTTAATGCGGACACGTTTGGTGCCGTTCTCACGTATGTTGCCGCGTTTGCAG
CGTATTGTGCGTCAGACCGCCTCAACCTTAAACCGCCCAACGGAACTGGTCGTTCATAACACCGAAGGTGAGTTGGATCG
TACAATTCTTGAACGTTTGGTTACGCCGTTTGAGCATATGCTACGTAACGCAATCGACCACGGTATTGAAGATACGGAAC
AACGTAGTGCTGCGAAAAAATCAGCCACAGGCCAAATTGAGCTGAACATTAGCCGTCAAGGTACAGATGTTATCGTTAGC
TTTAAAGATGATGGTAAGGGTATTGATGAAAGCACGATTAAAGCGAAAGCGCTAAACTTAGGTTTAATTAAAGCCGATCA
AGTGCTAGATAAACAAGAAATCTTACAGTTTATTTTCCATCCGGGTTTTAGTACGGCCAAAGAAGTGACGCAAATTTCTG
GACGTGGTGTTGGTCTTGATGTGGTACAAAGTGAAATTAAAGCACTGGGTGGACATGTCACGGTTGAATCGGAAATTGGA
TTCGGTACGACCTTCATTATTCGCGTACCGACTACGGTAGCGGTGAGTGATGCATTGATGGTGAAAGCCGGTGATCAACA
ATATGCGATTCCATTGGCGCAGATTGATCGTATTGTGCGTATTGCTCCAACAGCATTGGATCAGTATTTCCACAGCAAAG
ATGACCAATTCAAAATTGATGGTGTGAGTTATAAACTGCGCTATTTATCTGAGTTTTTATCCAATCAGCCGATTCCACGT
TTGAGTAATATTGGACATTCATTGCCAGTGTTGTTAATTAAAGGCAATAGTGGACAAACCATTGCATTATTAGTCGATCA
GTTGATTGGTTCACGTGCGCAAATTGTAGTGAAGCCAGTTGGACAACAATTTGCTAGCATTGGTGCAATTGCAGGTGCAA
CGATTTTGGGTGATGGCCATGTGTGTTTGATTTTAGATGGTCAGAATATTGCACGTCAGATTTTAAGCACCAAGCGTGTT
ACGCATGCAGCCGATCACCGTGACTTTGGTCGTCATCAGGATACGCGTCGTTTAGTGATGATTGTGGATGACTCGGTTAC
GGTTCGCAAGGTCACATCGCGCTTATTAGAGCGCCAAGGCTTTGATATTGTGACAGCAAAAGACGGTGTTGATGCGATGG
AGCAGCTTGAGAGTGTTAAACCGGACTTGATGTTGTTAGATATTGAAATGCCACGTATGGATGGTTTCGAAGTAACGAAC
TTGGTTCGTCACCACGAAATTCACCAGAACTTGCCGATTATTATGATTACATCGCGTACGGGTGAAAAACACCGTGAACG
TGCTTTCAGCTTGGGCGTGACACACTACATGGGCAAACCATTCCAAGAGGCAGAATTACTTGCCAACATTCAGCAGTTAT
TGGCTGAAAAGCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.395

100

0.612


Multiple sequence alignment