Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   BSUW23_RS21595 Genome accession   NC_014479
Coordinates   378019..378159 (+) Length   46 a.a.
NCBI ID   WP_013307914.1    Uniprot ID   -
Organism   Bacillus spizizenii str. W23     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 373019..383159
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSUW23_RS21590 srfAB 374952..377927 (+) 2976 Protein_354 surfactin non-ribosomal peptide synthetase SrfAB -
  BSUW23_RS21595 (BSUW23_01807) comS 378019..378159 (+) 141 WP_013307914.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5215.99 Da        Isoelectric Point: 8.5244

>NTDB_id=38232 BSUW23_RS21595 WP_013307914.1 378019..378159(+) (comS) [Bacillus spizizenii str. W23]
MNRSGKHLISSIILYPQPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=38232 BSUW23_RS21595 WP_013307914.1 378019..378159(+) (comS) [Bacillus spizizenii str. W23]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCAGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTTTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978

Multiple sequence alignment