Detailed information NTG0382026

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: FYA21_RS12650
• Genome accession: NZ_CP043180
• Coordinates: 2598249..2598950 (+)
• Length: 233 a.a.
• NCBI ID: WP_004747380.1
• Uniprot ID: A0A9E9PDK8
• Organism: Acinetobacter baumannii strain PG20180064
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2593249..2603950

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FYA21_RS12615 (FYA21_12615)	kdsB	2593775..2594536 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
FYA21_RS12620 (FYA21_12620)	-	2594548..2595525 (+)	978	WP_096640530.1	DNA polymerase III subunit delta'	-
FYA21_RS12625 (FYA21_12625)	-	2595537..2595878 (+)	342	WP_001183025.1	PilZ domain-containing protein	-
FYA21_RS12630 (FYA21_12630)	-	2595896..2596669 (+)	774	WP_005110997.1	TatD family hydrolase	-
FYA21_RS12635 (FYA21_12635)	-	2596707..2597315 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
FYA21_RS12640 (FYA21_12640)	-	2597325..2597879 (+)	555	WP_000841373.1	type II secretion system protein	-
FYA21_RS12645 (FYA21_12645)	xcpV	2597869..2598249 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
FYA21_RS12650 (FYA21_12650)	xcpW	2598249..2598950 (+)	702	WP_004747380.1	type II secretion system minor pseudopilin GspJ	Machinery gene
FYA21_RS12655 (FYA21_12655)	gspK	2598950..2599909 (+)	960	WP_096640532.1	type II secretion system minor pseudopilin GspK	-
FYA21_RS12660 (FYA21_12660)	-	2600139..2600735 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
FYA21_RS12665 (FYA21_12665)	ung	2600786..2601499 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
FYA21_RS12670 (FYA21_12670)	-	2601496..2602620 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
FYA21_RS12675 (FYA21_12675)	tadA	2602627..2603130 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
FYA21_RS12680 (FYA21_12680)	-	2603200..2603643 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26629.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=382026 FYA21_RS12650 WP_004747380.1 2598249..2598950(+) (xcpW) [Acinetobacter baumannii strain PG20180064]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=382026 FYA21_RS12650 WP_004747380.1 2598249..2598950(+) (xcpW) [Acinetobacter baumannii strain PG20180064]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTACATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996