Detailed information NTG0381747

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FYA54_RS04330
• Genome accession: NZ_CP043161
• Coordinates: 919185..920180 (+)
• Length: 331 a.a.
• NCBI ID: WP_059565465.1
• Uniprot ID: -
• Organism: Bordetella parapertussis strain H105
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 914185..925180

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FYA54_RS04305 (FYA54_04305)	-	915842..916228 (+)	387	WP_010927711.1	MOSC N-terminal beta barrel domain-containing protein	-
FYA54_RS04310 (FYA54_04310)	-	916236..917453 (-)	1218	WP_003808568.1	benzoate/H(+) symporter BenE family transporter	-
FYA54_RS04315 (FYA54_04315)	-	917450..917701 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
FYA54_RS04320 (FYA54_04320)	coaD	917756..918265 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
FYA54_RS04325 (FYA54_04325)	rsmD	918286..918906 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FYA54_RS04330 (FYA54_04330)	pilA	919185..920180 (+)	996	WP_059565465.1	signal recognition particle-docking protein FtsY	Machinery gene
FYA54_RS04335 (FYA54_04335)	-	920227..921825 (-)	1599	WP_010927713.1	CYTH and CHAD domain-containing protein	-
FYA54_RS04340 (FYA54_04340)	phnE	922064..922885 (-)	822	WP_003808584.1	phosphonate ABC transporter, permease protein PhnE	-
FYA54_RS04345 (FYA54_04345)	phnE	922882..923751 (-)	870	WP_169507383.1	phosphonate ABC transporter, permease protein PhnE	-
FYA54_RS04350 (FYA54_04350)	phnC	923769..924539 (-)	771	WP_010927715.1	phosphonate ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 331 a.a.
• Molecular weight: 34755.83 Da
• Isoelectric Point: 6.1485

>NTDB_id=381747 FYA54_RS04330 WP_059565465.1 919185..920180(+) (pilA) [Bordetella parapertussis strain H105]
MASPPVAESQPPVAEPQPPVAAAPEAPRKASWLSRLKQGLSRTGQNIGGLFVGVKVDENLFEELESALIMADAGIEATEK
LLAALRARVKKERIDDPAQVKTALRQLLADHLWPLERSFDLGRAQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLA
AGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGRARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAE
ASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFV
ADEFAAALLAD

Nucleotide

• Length: 996 bp

>NTDB_id=381747 FYA54_RS04330 WP_059565465.1 919185..920180(+) (pilA) [Bordetella parapertussis strain H105]
ATGGCGTCGCCGCCTGTCGCCGAGTCGCAGCCACCGGTCGCCGAGCCGCAGCCACCGGTCGCGGCCGCGCCCGAGGCGCC
CCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGCCAGAACATCGGCGGGCTGTTCGTCGGCG
TGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGCCGACGCGGGCATCGAGGCCACCGAGAAA
CTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGGCGCAGGTCAAGACGGCGCTGCGCCAATT
GCTGGCCGACCATCTGTGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCCCAGCCCCTGGTGGTCATGATCGCCGGCG
TCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCG
GCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCAGCCGCAACAATGTGACCGTGATCTCGCA
GGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGTGCGCGCAACGTGGGCGTGGTGATGGTGG
ATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAAGATCCGCCGCGTCATCGGCAAGGCCGAG
GCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGAACGCGCTGGCGCAAATCCGCGCCTTCGA
CGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCACGCTGGCGGCCGTGGCCG
CCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGAGGGGTTGGAGGACCTGCAGCCCTTCGTG
GCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (47-106)

• SRP54-type protein, GTPase domain (SRP54) (127-329)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.211	97.281	0.547