Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | BSUW23_RS06000 | Genome accession | NC_014479 |
| Coordinates | 1164478..1165431 (+) | Length | 317 a.a. |
| NCBI ID | WP_003224557.1 | Uniprot ID | - |
| Organism | Bacillus spizizenii str. W23 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1159478..1170431
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSUW23_RS05975 (BSUW23_05685) | argF | 1161306..1162250 (+) | 945 | WP_003224547.1 | ornithine carbamoyltransferase | - |
| BSUW23_RS05980 (BSUW23_05690) | - | 1162351..1162530 (+) | 180 | WP_003224549.1 | YjzC family protein | - |
| BSUW23_RS05985 (BSUW23_05695) | - | 1162576..1162761 (-) | 186 | WP_003224551.1 | YjzD family protein | - |
| BSUW23_RS05990 (BSUW23_05700) | - | 1163012..1163746 (+) | 735 | WP_003224553.1 | hypothetical protein | - |
| BSUW23_RS05995 (BSUW23_05705) | - | 1163830..1164387 (+) | 558 | WP_003224555.1 | hypothetical protein | - |
| BSUW23_RS06000 (BSUW23_05710) | med | 1164478..1165431 (+) | 954 | WP_003224557.1 | transcriptional regulator Med | Regulator |
| BSUW23_RS06005 (BSUW23_05715) | comZ | 1165446..1165637 (+) | 192 | WP_003224559.1 | ComG operon transcriptional repressor ComZ | Regulator |
| BSUW23_RS06010 (BSUW23_05720) | - | 1165667..1165894 (-) | 228 | WP_072183380.1 | hypothetical protein | - |
| BSUW23_RS06015 (BSUW23_05725) | fabH | 1166060..1166998 (+) | 939 | WP_003224562.1 | beta-ketoacyl-ACP synthase III | - |
| BSUW23_RS06020 (BSUW23_05730) | fabF | 1167023..1168264 (+) | 1242 | WP_003224564.1 | beta-ketoacyl-ACP synthase II | - |
| BSUW23_RS06025 (BSUW23_05735) | - | 1168340..1169125 (+) | 786 | WP_003224566.1 | DUF2268 domain-containing protein | - |
| BSUW23_RS06030 (BSUW23_05740) | appD | 1169316..1170302 (+) | 987 | WP_003224568.1 | oligopeptide ABC transporter ATP-binding protein AppD | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35322.88 Da Isoelectric Point: 4.6608
>NTDB_id=38174 BSUW23_RS06000 WP_003224557.1 1164478..1165431(+) (med) [Bacillus spizizenii str. W23]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTDEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVSEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHLSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLKTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTDEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVSEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHLSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLKTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE
Nucleotide
Download Length: 954 bp
>NTDB_id=38174 BSUW23_RS06000 WP_003224557.1 1164478..1165431(+) (med) [Bacillus spizizenii str. W23]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTAAGCGGTTGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCAAAATACAATGTGGATGTCTACTATAAAGAAGGCGTTAAAACAGATGAAGATATTATAAATGCAATTGAGGAT
TTTCATAAGCGGGGTGTTAATCTTCTCTATGGCCATGGGAGTGAATATGCAGAGGTGTTTAACTTGGTCAGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCTAATGCTAAAGCAAAAGCTGATAATGTGACGAGTGTCCATTTCAGCGGCGAAGCAA
TGGGTTTTTTTGGAGGAATGACAGCTGCCCATCTGTCGAAAACGAATCAGGTCGGCGTGATTGCTTCCTTTACGTGGCAG
CCGGAGGTAGACGGTTTTATCAAAGGGGCCAAATATGAAAATCCGGATATAGAAGTCAACACAAAATATACGGATCATTG
GGATGATGATACGACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCTGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGCCTTTATGCCATCGGTTACGTCACAGATCAATCGGACCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCTTATGAAATCATCGCTGAGCAATTCAACAAAGG
CACCCTTGAAGGCGGCGATCATTACTACGACCTGAAAACGGGGGTTGTTGAAATGGGAACATTCAGCCCGCTTGTCGATA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACGTACAACAAAACAGGCGAACTGCCAAAAAACGAGTAA
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTAAGCGGTTGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCAAAATACAATGTGGATGTCTACTATAAAGAAGGCGTTAAAACAGATGAAGATATTATAAATGCAATTGAGGAT
TTTCATAAGCGGGGTGTTAATCTTCTCTATGGCCATGGGAGTGAATATGCAGAGGTGTTTAACTTGGTCAGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCTAATGCTAAAGCAAAAGCTGATAATGTGACGAGTGTCCATTTCAGCGGCGAAGCAA
TGGGTTTTTTTGGAGGAATGACAGCTGCCCATCTGTCGAAAACGAATCAGGTCGGCGTGATTGCTTCCTTTACGTGGCAG
CCGGAGGTAGACGGTTTTATCAAAGGGGCCAAATATGAAAATCCGGATATAGAAGTCAACACAAAATATACGGATCATTG
GGATGATGATACGACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCTGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGCCTTTATGCCATCGGTTACGTCACAGATCAATCGGACCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCTTATGAAATCATCGCTGAGCAATTCAACAAAGG
CACCCTTGAAGGCGGCGATCATTACTACGACCTGAAAACGGGGGTTGTTGAAATGGGAACATTCAGCCCGCTTGTCGATA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACGTACAACAAAACAGGCGAACTGCCAAAAAACGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
98.423 |
100 |
0.984 |