Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   HC362_RS07920 Genome accession   NZ_CP050693
Coordinates   1875146..1875955 (+) Length   269 a.a.
NCBI ID   WP_243083207.1    Uniprot ID   -
Organism   Streptomyces sp. 891-h     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1870146..1880955
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HC362_RS07910 (HC362_07870) - 1870619..1873540 (-) 2922 WP_243083205.1 vitamin B12-dependent ribonucleotide reductase -
  HC362_RS07915 nrdR 1873704..1874399 (-) 696 WP_243083206.1 transcriptional regulator NrdR -
  HC362_RS07920 (HC362_07880) dinR/lexA 1875146..1875955 (+) 810 WP_243083207.1 transcriptional repressor LexA Regulator
  HC362_RS07925 (HC362_07885) - 1876220..1878202 (-) 1983 WP_243083208.1 ATP-dependent DNA helicase -
  HC362_RS07930 (HC362_07890) - 1878343..1880148 (-) 1806 WP_243083209.1 IucA/IucC family siderophore biosynthesis protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29021.76 Da        Isoelectric Point: 6.5021

>NTDB_id=381701 HC362_RS07920 WP_243083207.1 1875146..1875955(+) (dinR/lexA) [Streptomyces sp. 891-h]
MTTTADSATITSQNRAAQPTAQPIDEIQPVNDAMNAEMQEGQQAKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRR
GYPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDAPSSTQAAADTTGKPSASYVPLVGRIAAGG
PILAEESVEDVFPLPRQLVGDGELFVLKVIGDSMVEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVW
LLPHNSSYQPIPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 810 bp        

>NTDB_id=381701 HC362_RS07920 WP_243083207.1 1875146..1875955(+) (dinR/lexA) [Streptomyces sp. 891-h]
GTGACCACGACCGCAGACAGCGCCACCATCACCTCCCAGAACCGCGCAGCTCAGCCGACAGCTCAGCCAATTGACGAAAT
TCAGCCCGTGAATGACGCCATGAACGCAGAGATGCAGGAAGGCCAACAAGCGAAGCGATCGCTTCCCGGCCGACCTCCCG
GCATCCGCGCCGACAGTTCGGGACTCACCGACCGGCAGCGCCGGGTGATCGAGGTGATCCGTGACTCGGTCCAGCGGCGC
GGCTACCCACCGTCCATGCGGGAGATCGGCCAGGCGGTCGGGCTCTCCAGCACCTCCTCGGTGGCACACCAGCTGATGGC
GCTCGAGCGCAAGGGCTTTCTGCGCCGCGACCCGCACCGGCCCCGCGCCTACGAGGTGCGTGGCTCGGACGCCCCCAGCA
GCACGCAGGCCGCCGCCGACACCACGGGCAAGCCGTCGGCCTCCTACGTTCCGCTGGTCGGCCGGATCGCCGCCGGCGGT
CCCATCCTCGCCGAGGAGTCGGTCGAGGACGTCTTCCCGCTGCCGCGCCAGCTGGTGGGCGACGGCGAACTGTTCGTCCT
GAAGGTGATCGGCGACTCGATGGTCGAGGCCGCGATCTGCGACGGCGACTGGGTGACGGTACGGCGTCAGCCCGTCGCGG
AGAACGGCGACATCGTGGCGGCGATGCTGGACGGCGAGGCCACCGTGAAGCGCTTCAAGCGCGAGGACGGACATGTGTGG
CTGCTCCCGCACAACTCCTCGTACCAGCCGATCCCGGGTGACGACGCCACGATCCTCGGGAAGGTCGTCGCCGTGCTGCG
CAGGGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(151-263)

LexA DNA binding domain (LexA_DNA_bind)

(60-123)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.327

79.554

0.361