Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BSUW23_RS04490 Genome accession   NC_014479
Coordinates   885141..885932 (+) Length   263 a.a.
NCBI ID   WP_003223233.1    Uniprot ID   -
Organism   Bacillus spizizenii str. W23     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 880141..890932
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSUW23_RS04460 (BSUW23_04255) - 881056..882087 (+) 1032 WP_003223220.1 iron chelate uptake ABC transporter family permease subunit -
  BSUW23_RS04465 - 882201..883008 (+) 808 Protein_839 PhzF family phenazine biosynthesis isomerase -
  BSUW23_RS04470 (BSUW23_04270) - 883095..883679 (+) 585 WP_003223222.1 nitroreductase -
  BSUW23_RS04475 (BSUW23_04275) - 883718..883909 (-) 192 WP_003223225.1 YfhD family protein -
  BSUW23_RS04480 (BSUW23_04280) - 883976..884086 (-) 111 WP_003223230.1 YfhE family protein -
  BSUW23_RS04485 (BSUW23_04285) - 884141..885052 (-) 912 WP_003223231.1 TIGR01777 family oxidoreductase -
  BSUW23_RS04490 (BSUW23_04290) recX 885141..885932 (+) 792 WP_003223233.1 recombination regulator RecX Regulator
  BSUW23_RS04495 (BSUW23_04295) - 885941..886261 (+) 321 WP_003223235.1 YfhH family protein -
  BSUW23_RS04505 (BSUW23_04300) - 886399..887592 (+) 1194 WP_003223237.1 MFS transporter -
  BSUW23_RS04510 (BSUW23_04305) - 887626..887778 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  BSUW23_RS04515 (BSUW23_04310) - 887903..888172 (+) 270 WP_003223243.1 YfhJ family protein -
  BSUW23_RS04520 (BSUW23_04315) - 888316..888834 (+) 519 WP_003223245.1 SH3 domain-containing protein -
  BSUW23_RS04525 (BSUW23_04320) - 888920..889252 (+) 333 WP_032727352.1 SdpI family protein -
  BSUW23_RS04530 (BSUW23_04325) - 889239..890099 (+) 861 WP_003223248.1 alpha/beta fold hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30884.16 Da        Isoelectric Point: 6.6695

>NTDB_id=38166 BSUW23_RS04490 WP_003223233.1 885141..885932(+) (recX) [Bacillus spizizenii str. W23]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALEFLSYRMRSTKEV
EDHLKKKEISAPVIAEVIHKLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=38166 BSUW23_RS04490 WP_003223233.1 885141..885932(+) (recX) [Bacillus spizizenii str. W23]
ATGCCATTTATTACAAAAATATCAACGCAAAAGAAGAATACGGAACGCTTCAATATCTTTCTCGATGAAAAATACGCCTT
CAGTGTGGACGCGGACGTGCTCGTGAAATTTGAGCTCAAAAAGGGAAAAGAACTTGATGACCTTGACATCATTGAGATTC
AATACGGCGATGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGAATTTTTATCCTACCGGATGAGGTCAACGAAAGAGGTT
GAGGACCACTTAAAGAAAAAAGAAATTTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTGAACGACTACAAGTACTT
AAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAG
AGCTGAGAGCAAAGGGAATCGACGACGATACAATTAAGGAGGCGCTGAGTTCCTTTTCCTTTGAAGATCAGACGAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAGGATAAAAAACTTTCAACAAAAGAACTCAAACAGCGCGCCCAGATGCA
GCTACAGCGCAAGGGCTTCTCATTTGATGTCATCAGCGCGGCACTGGAGCAGATTGAATATGAAAATGATGAAGACACAG
AAAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTACGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

96.578

100

0.966

Multiple sequence alignment