Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   HCU71_RS03080 Genome accession   NZ_CP050691
Coordinates   630375..631175 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain PMB196-1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 625375..636175
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HCU71_RS03065 (HCU71_03065) walK 626044..627870 (+) 1827 WP_167780380.1 cell wall metabolism sensor histidine kinase WalK -
  HCU71_RS03070 (HCU71_03070) yycH 627863..629197 (+) 1335 WP_167780381.1 two-component system activity regulator YycH -
  HCU71_RS03075 (HCU71_03075) yycI 629198..629986 (+) 789 WP_001104165.1 two-component system regulatory protein YycI -
  HCU71_RS03080 (HCU71_03080) vicX 630375..631175 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  HCU71_RS03085 (HCU71_03085) adsA 631402..633720 (+) 2319 WP_167780382.1 LPXTG-anchored adenosine synthase AdsA -
  HCU71_RS03090 (HCU71_03090) rlmH 634088..634567 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  HCU71_RS03095 (HCU71_03095) - 634772..634906 (-) 135 WP_001790628.1 hypothetical protein -
  HCU71_RS03100 (HCU71_03100) - 634870..634962 (+) 93 WP_001790000.1 hypothetical protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=381610 HCU71_RS03080 WP_000088649.1 630375..631175(+) (vicX) [Staphylococcus aureus strain PMB196-1]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=381610 HCU71_RS03080 WP_000088649.1 630375..631175(+) (vicX) [Staphylococcus aureus strain PMB196-1]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGATGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474