Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   HCU70_RS05560 Genome accession   NZ_CP050690
Coordinates   1154261..1155061 (-) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain PMB179-1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1149261..1160061
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HCU70_RS05545 (HCU70_05545) - 1149835..1150770 (-) 936 WP_000251225.1 dsDNA nuclease domain-containing protein -
  HCU70_RS05550 (HCU70_05550) rlmH 1150869..1151348 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  HCU70_RS05555 (HCU70_05555) adsA 1151716..1154034 (-) 2319 WP_000645769.1 LPXTG-anchored adenosine synthase AdsA -
  HCU70_RS05560 (HCU70_05560) vicX 1154261..1155061 (-) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  HCU70_RS05565 (HCU70_05565) yycI 1155457..1156245 (-) 789 WP_001104166.1 two-component system regulatory protein YycI -
  HCU70_RS05570 (HCU70_05570) yycH 1156246..1157580 (-) 1335 WP_001060140.1 two-component system activity regulator YycH -
  HCU70_RS05575 (HCU70_05575) walK 1157573..1159399 (-) 1827 WP_167774967.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=381544 HCU70_RS05560 WP_000088649.1 1154261..1155061(-) (vicX) [Staphylococcus aureus strain PMB179-1]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=381544 HCU70_RS05560 WP_000088649.1 1154261..1155061(-) (vicX) [Staphylococcus aureus strain PMB179-1]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGTGATATGGGACATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474