Detailed information NTG0038151

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: HPPN120_RS00755
• Genome accession: NC_017378
• Coordinates: 156071..157114 (+)
• Length: 347 a.a.
• NCBI ID: WP_000963124.1
• Uniprot ID: -
• Organism: Helicobacter pylori Puno120
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 151071..162114

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPPN120_RS00720 (HPPN120_00750)	-	151661..151879 (+)	219	WP_014536851.1	cytochrome c oxidase, cbb3-type, CcoQ subunit	-
HPPN120_RS00725 (HPPN120_00755)	ccoP	151881..152759 (+)	879	WP_000346839.1	cytochrome-c oxidase, cbb3-type subunit III	-
HPPN120_RS00730 (HPPN120_00760)	-	152770..152976 (+)	207	WP_000670525.1	DUF4006 family protein	-
HPPN120_RS00735 (HPPN120_00770)	-	153077..153661 (+)	585	WP_001222035.1	hypothetical protein	-
HPPN120_RS00740 (HPPN120_00775)	-	153673..154254 (+)	582	WP_000660356.1	hypothetical protein	-
HPPN120_RS00745 (HPPN120_00780)	-	154342..155109 (+)	768	WP_000506337.1	hypothetical protein	-
HPPN120_RS00750 (HPPN120_00785)	-	155106..155972 (-)	867	WP_000626306.1	menaquinone biosynthesis family protein	-
HPPN120_RS00755 (HPPN120_00790)	recA	156071..157114 (+)	1044	WP_000963124.1	recombinase RecA	Machinery gene
HPPN120_RS00760 (HPPN120_00795)	eno	157126..158406 (+)	1281	WP_000955609.1	phosphopyruvate hydratase	-
HPPN120_RS00765 (HPPN120_00800)	-	158399..158674 (+)	276	WP_000168598.1	hypothetical protein	-
HPPN120_RS00770 (HPPN120_00805)	-	158690..159286 (+)	597	WP_014536853.1	AMIN domain-containing protein	-
HPPN120_RS00775 (HPPN120_00810)	-	159291..159779 (+)	489	WP_001216267.1	shikimate kinase	-
HPPN120_RS00780 (HPPN120_00815)	-	159801..160757 (+)	957	WP_000952256.1	PDC sensor domain-containing protein	-
HPPN120_RS00785 (HPPN120_00820)	-	160754..161857 (-)	1104	WP_000028805.1	glycosyltransferase family 8 protein	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37626.38 Da
• Isoelectric Point: 5.7176

>NTDB_id=38151 HPPN120_RS00755 WP_000963124.1 156071..157114(+) (recA) [Helicobacter pylori Puno120]
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDAISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKSGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANE
ITLKIKESIGSNEEIMPLPDEPLEEME

Nucleotide

• Length: 1044 bp

>NTDB_id=38151 HPPN120_RS00755 WP_000963124.1 156071..157114(+) (recA) [Helicobacter pylori Puno120]
ATGGCAATAGATGAAGACAAACAAAAAGCGATTTCTTTAGCGATCAAACAAATTGATAAGGTTTTTGGTAAGGGGGCGTT
GGTGCGCCTTGGGGATAAGCAAGTAGAAAAGATTGACGCTATTTCTACAGGCTCGTTAGGGTTGGATCTGGCTTTAGGGA
TTGGGGGCGTTCCAAAAGGCAGGATCATTGAAATTTATGGGCCAGAGTCAAGCGGGAAGACCACTCTAAGCTTGCATATC
ATTGCAGAATGCCAAAAAAGTGGGGGCGTGTGCGCGTTTATTGACGCTGAGCATGCCCTAGATGTGCATTATGCTAAGAG
GCTAGGCGTGGATACGGAAAACTTACTCGTTTCCCAACCTGATACAGGCGAGCAAGCTTTAGAGATTTTAGAAACGATCA
CCAGAAGCGGAGGGATTGATTTAGTGGTGGTGGATTCCGTAGCGGCTCTTACGCCTAAAGCGGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGGCTTATGAGCCATGCGTTAAGAAAGATCACCGGTGTTTTGCACAAGATGAA
CACTACTTTAATTTTTATCAATCAAATCAGAATGAAGATTGGCATGATGGGTTATGGGAGTCCAGAGACCACAACCGGAG
GTAATGCCTTAAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGGATTGCGGCTTTAAAACAAAACGAACAGCATATC
GGCAACAGGGCTAAAGCCAAAGTGGTTAAAAATAAAGTCGCTCCACCCTTTAGAGAAGCGGAATTTGACATCATGTTTGG
GGAAGGGATTTCTAAAGAGGGCGAAATCATTGATTATGGCGTGAAATTAGACATTGTGGATAAGAGTGGGGCATGGCTTA
GCTACCAGGATAAAAAGCTAGGGCAAGGCCGAGAAAACGCTAAAGCCTTACTGAAAGAAGACAAAGCCCTAGCGAATGAA
ATCACTCTTAAGATTAAAGAGAGCATTGGCTCTAATGAAGAGATCATGCCCTTACCAGATGAGCCTTTAGAAGAAATGGA
ATAG

Domains

Predicted by InterProScan.

• recA bacterial DNA recombination protein (RecA_N) (9-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Helicobacter pylori strain NCTC11637	99.424	100	0.994
recA	Helicobacter pylori 26695	98.847	100	0.988
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	78.659	94.524	0.744
recA	Acinetobacter nosocomialis M2	63.45	98.559	0.625
recA	Staphylococcus aureus strain ATCC 12600	63.343	98.271	0.622
recA	Neisseria gonorrhoeae strain FA1090	66.154	93.66	0.62
recA	Neisseria gonorrhoeae MS11	66.154	93.66	0.62
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.458	95.677	0.617
recA	Bacillus subtilis subsp. subtilis str. 168	65.231	93.66	0.611
recA	Acinetobacter baumannii D1279779	64.526	94.236	0.608
recA	Acinetobacter baylyi ADP1	63.914	94.236	0.602
recA	Ralstonia pseudosolanacearum GMI1000	61.905	96.83	0.599
recA	Vibrio cholerae strain A1552	61.31	96.83	0.594
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.31	96.83	0.594
recA	Pseudomonas stutzeri DSM 10701	60.234	98.559	0.594
recA	Glaesserella parasuis strain SC1401	60.366	94.524	0.571
recA	Streptococcus pneumoniae R6	55.84	100	0.565
recA	Streptococcus pneumoniae R36A	55.84	100	0.565
recA	Streptococcus pneumoniae Rx1	55.84	100	0.565
recA	Streptococcus pneumoniae D39	55.84	100	0.565
recA	Streptococcus pneumoniae TIGR4	55.84	100	0.565
recA	Latilactobacillus sakei subsp. sakei 23K	54.622	100	0.562
recA	Streptococcus pyogenes NZ131	57.576	95.101	0.548
recA	Lactococcus lactis subsp. cremoris KW2	57.751	94.813	0.548
recA	Streptococcus mitis NCTC 12261	57.447	94.813	0.545
recA	Streptococcus mitis SK321	57.447	94.813	0.545
recA	Streptococcus thermophilus LMD-9	56.667	95.101	0.539
recA	Streptococcus thermophilus LMG 18311	56.667	95.101	0.539
recA	Streptococcus mutans UA159	55.988	96.254	0.539
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.442	93.948	0.53