Detailed information NTG0381485

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: G6008_RS15435
• Genome accession: NZ_CP050646
• Coordinates: 3237845..3238828 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain PapM-36-2
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3232845..3243828

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G6008_RS15420 (G6008_15425)	dppA	3234145..3235752 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
G6008_RS15425 (G6008_15430)	dppB	3235903..3236922 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
G6008_RS15430 (G6008_15435)	dppC	3236932..3237834 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
G6008_RS15435 (G6008_15440)	amiE	3237845..3238828 (+)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
G6008_RS15440 (G6008_15445)	dppF	3238825..3239829 (+)	1005	WP_000107035.1	dipeptide ABC transporter ATP-binding subunit DppF	-
G6008_RS15445 (G6008_15450)	yhjV	3239859..3241130 (-)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
G6008_RS15450 (G6008_15455)	-	3241606..3241713 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
G6008_RS15455 (G6008_15460)	-	3242089..3242196 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
G6008_RS15460 (G6008_15465)	-	3242567..3243601 (-)	1035	Protein_3051	IS481 family transposase	-
G6008_RS15465 (G6008_15470)	-	3243673..3243780 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=381485 G6008_RS15435 WP_001196496.1 3237845..3238828(+) (amiE) [Escherichia coli strain PapM-36-2]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=381485 G6008_RS15435 WP_001196496.1 3237845..3238828(+) (amiE) [Escherichia coli strain PapM-36-2]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTTGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCCCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAACTGGTGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCATGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTCGTTCCCGGCAAGTACGATCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCCACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401