Detailed information NTG0038099

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: GALF_RS02335
• Genome accession: NC_014394
• Coordinates: 504571..505536 (-)
• Length: 321 a.a.
• NCBI ID: WP_013292448.1
• Uniprot ID: D9SC40
• Organism: Gallionella capsiferriformans ES-2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 499571..510536

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GALF_RS02300 (Galf_0454)	-	499623..500636 (+)	1014	WP_013292441.1	hypothetical protein	-
GALF_RS02305 (Galf_0455)	-	500644..501240 (+)	597	WP_041937936.1	glutathione S-transferase N-terminal domain-containing protein	-
GALF_RS02310 (Galf_0456)	-	501237..501623 (+)	387	WP_013292443.1	ClpXP protease specificity-enhancing factor	-
GALF_RS02315 (Galf_0457)	rpoH	501674..502528 (-)	855	WP_013292444.1	RNA polymerase sigma factor RpoH	-
GALF_RS02320 (Galf_0458)	-	502678..502863 (-)	186	WP_013292445.1	hypothetical protein	-
GALF_RS02325 (Galf_0459)	ftsX	502971..503876 (-)	906	WP_013292446.1	permease-like cell division protein FtsX	-
GALF_RS02330 (Galf_0460)	ftsE	503873..504574 (-)	702	WP_013292447.1	cell division ATP-binding protein FtsE	-
GALF_RS02335 (Galf_0461)	pilA	504571..505536 (-)	966	WP_013292448.1	signal recognition particle-docking protein FtsY	Machinery gene
GALF_RS02340 (Galf_0462)	-	505642..507000 (+)	1359	WP_013292449.1	pitrilysin family protein	-
GALF_RS02345 (Galf_0463)	-	506990..508312 (+)	1323	WP_013292450.1	pitrilysin family protein	-
GALF_RS02350 (Galf_0464)	rsmD	508278..508841 (+)	564	WP_013292451.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
GALF_RS02355 (Galf_0465)	coaD	508838..509320 (+)	483	WP_013292452.1	pantetheine-phosphate adenylyltransferase	-
GALF_RS02360 (Galf_0466)	-	509366..509620 (+)	255	WP_013292453.1	YfhL family 4Fe-4S dicluster ferredoxin	-
GALF_RS02365 (Galf_0467)	-	509667..509981 (-)	315	WP_013292454.1	DUF167 domain-containing protein	-

Sequence

Protein

• Length: 321 a.a.
• Molecular weight: 34324.76 Da
• Isoelectric Point: 6.9230

>NTDB_id=38099 GALF_RS02335 WP_013292448.1 504571..505536(-) (pilA) [Gallionella capsiferriformans ES-2]
MFSFLKKSTPAKAEETVAEKRSWIDRLKAGLSRTGNQLADLFSRGGKIDDDLYEELETILITADVGMDATNTLLADLRRH
VREHKLVEAEELKAGLAHCLLKLLGPLAVPLHAETHKPFVIMMVGVNGAGKTTSIGKLAKYLQSQGLSVMLAAGDTFRAA
AREQLMTWGERNNVTVIAQQSGDAAAVIYDAVQAAQARKIDVVLADTAGRLTTQAHLMEEIKKVKRVIAKVLPDAPHEVL
LVLDANTGQNALSQVKAFDAALGVTGLILTKLDGTAKGGVIAAIAKAHPIPVRFIGVGEGLDDLRPFDAQEFIDALLGLS
A

Nucleotide

• Length: 966 bp

>NTDB_id=38099 GALF_RS02335 WP_013292448.1 504571..505536(-) (pilA) [Gallionella capsiferriformans ES-2]
ATGTTTAGTTTTTTAAAAAAGAGCACACCGGCAAAAGCCGAAGAAACCGTCGCTGAAAAGCGCAGTTGGATTGATCGCTT
AAAAGCGGGCTTATCGCGTACCGGCAACCAGCTCGCCGACCTGTTCAGCCGCGGCGGAAAAATCGACGATGACCTGTACG
AAGAACTCGAAACTATTCTGATCACAGCGGATGTCGGCATGGATGCGACCAATACGCTGCTCGCCGATTTAAGACGCCAC
GTCAGGGAACACAAACTCGTTGAAGCCGAAGAACTCAAGGCCGGGCTGGCACACTGCCTGCTCAAACTGCTGGGACCGCT
GGCTGTGCCACTGCACGCCGAAACGCACAAACCCTTCGTCATCATGATGGTCGGCGTCAATGGCGCGGGCAAAACCACCT
CCATCGGCAAACTGGCGAAATATCTGCAGTCGCAAGGGCTGTCGGTCATGCTGGCAGCGGGCGATACCTTCCGCGCCGCC
GCGCGTGAGCAACTGATGACCTGGGGCGAGCGCAACAATGTGACCGTGATTGCTCAACAAAGCGGCGACGCCGCTGCCGT
AATTTATGATGCCGTACAAGCCGCTCAGGCTCGTAAAATTGACGTGGTGTTAGCCGATACGGCAGGACGTCTGACCACGC
AGGCTCACCTGATGGAAGAAATTAAAAAGGTCAAACGCGTCATCGCAAAGGTGCTGCCCGATGCCCCGCATGAAGTGCTG
CTGGTACTGGATGCGAATACGGGACAGAACGCATTAAGTCAGGTGAAAGCGTTCGATGCGGCCTTGGGCGTGACGGGTTT
GATTTTGACCAAACTGGACGGTACAGCGAAGGGCGGCGTCATCGCAGCGATCGCCAAAGCACACCCGATCCCCGTGCGCT
TCATCGGCGTAGGCGAAGGGTTGGATGATCTTCGCCCGTTCGACGCACAGGAGTTTATCGACGCACTGCTGGGGTTGTCT
GCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (118-318)

• SRP54-type protein, helical bundle domain (SRP54_N) (35-94)

3D structure

• AlphaFold DB: D9SC40

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	64.901	94.081	0.611