Detailed information
Bioinformatically predicted
Overview
| Name | pilM | Type | Machinery gene |
| Locus tag | BMF77_RS06895 | Genome accession | NZ_CP043056 |
| Coordinates | 1480125..1481231 (+) | Length | 368 a.a. |
| NCBI ID | WP_148761666.1 | Uniprot ID | A0A6H2C058 |
| Organism | Dolichospermum sp. UHCC 0315A | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1475125..1486231
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BMF77_RS06870 (BMF77_01360) | - | 1475698..1476201 (+) | 504 | WP_148761660.1 | gamma carbonic anhydrase family protein | - |
| BMF77_RS06875 (BMF77_01361) | - | 1476388..1476513 (+) | 126 | WP_148761662.1 | photosystem II protein Y | - |
| BMF77_RS06880 (BMF77_01362) | - | 1476599..1477852 (+) | 1254 | WP_148761664.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| BMF77_RS06885 (BMF77_01363) | - | 1478317..1479615 (-) | 1299 | WP_148766846.1 | sugar ABC transporter substrate-binding protein | - |
| BMF77_RS28580 | - | 1479806..1479931 (-) | 126 | WP_256370338.1 | hypothetical protein | - |
| BMF77_RS27715 | - | 1479876..1480019 (-) | 144 | WP_246863079.1 | hypothetical protein | - |
| BMF77_RS06895 (BMF77_01364) | pilM | 1480125..1481231 (+) | 1107 | WP_148761666.1 | type IV pilus assembly protein PilM | Machinery gene |
| BMF77_RS06900 (BMF77_01365) | - | 1481236..1482045 (+) | 810 | WP_148761668.1 | PilN domain-containing protein | - |
| BMF77_RS06905 (BMF77_01366) | - | 1482042..1482809 (+) | 768 | WP_148761670.1 | pilus assembly protein PilO | - |
| BMF77_RS06910 (BMF77_01367) | - | 1482923..1485235 (+) | 2313 | WP_148761672.1 | type IV pilus secretin family protein | - |
| BMF77_RS06915 (BMF77_01368) | pyrR | 1485365..1485901 (-) | 537 | WP_148761674.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 40501.52 Da Isoelectric Point: 4.4409
>NTDB_id=380406 BMF77_RS06895 WP_148761666.1 1480125..1481231(+) (pilM) [Dolichospermum sp. UHCC 0315A]
MVKAFTSFFGKSSKGIGIELAPERVNVVQLHKHRQNLKIESLTTVPVPEGIFIDGQIADSVGMSEIIQQAIAESKTKATR
VITCIPGRESIIRLIPVPSELDDKELRDIILNHEASLYLPYPREEADVDYQKLGDFIDEDGIEKVQVLLVATRKDVTQTY
LNTFEQAGLTVDILEINSFALIRTIRDQLRLFGPEEAAVLVDIEFDSTEIAIIINGIPQFSRTVPIGTYQLQTALSRAMN
LPASRDMDMLESMTIPTTSPDSAHSGVTGSNPGMASMLRVLGELADELRRSIDFYLNQSENLEVVQILLAGPGGGLPQID
EFFTQRLSLPTTQIDPITSLSLEVDAEKYPLIKRPGLGIVLGLGMRGL
MVKAFTSFFGKSSKGIGIELAPERVNVVQLHKHRQNLKIESLTTVPVPEGIFIDGQIADSVGMSEIIQQAIAESKTKATR
VITCIPGRESIIRLIPVPSELDDKELRDIILNHEASLYLPYPREEADVDYQKLGDFIDEDGIEKVQVLLVATRKDVTQTY
LNTFEQAGLTVDILEINSFALIRTIRDQLRLFGPEEAAVLVDIEFDSTEIAIIINGIPQFSRTVPIGTYQLQTALSRAMN
LPASRDMDMLESMTIPTTSPDSAHSGVTGSNPGMASMLRVLGELADELRRSIDFYLNQSENLEVVQILLAGPGGGLPQID
EFFTQRLSLPTTQIDPITSLSLEVDAEKYPLIKRPGLGIVLGLGMRGL
Nucleotide
Download Length: 1107 bp
>NTDB_id=380406 BMF77_RS06895 WP_148761666.1 1480125..1481231(+) (pilM) [Dolichospermum sp. UHCC 0315A]
ATGGTTAAAGCCTTCACTAGTTTCTTTGGTAAATCCAGTAAAGGTATTGGTATTGAACTAGCGCCGGAACGGGTAAACGT
AGTCCAACTACATAAACACCGCCAAAACTTAAAAATCGAATCTTTGACAACAGTACCAGTACCAGAAGGTATATTTATTG
ATGGTCAAATTGCTGATTCTGTGGGAATGTCCGAAATTATTCAGCAAGCGATCGCCGAAAGCAAAACTAAAGCTACCCGT
GTTATTACTTGTATCCCAGGACGAGAATCCATTATCCGGTTGATTCCTGTCCCATCTGAATTAGATGACAAGGAGTTGCG
GGACATAATACTCAACCATGAAGCATCTTTATATTTACCCTATCCCAGAGAAGAAGCTGATGTTGATTATCAAAAACTTG
GGGACTTTATAGACGAAGACGGCATTGAGAAAGTGCAGGTTTTGTTAGTTGCGACTCGTAAAGATGTCACGCAAACCTAT
TTAAATACCTTTGAACAGGCAGGATTAACAGTTGATATCTTAGAAATTAACAGCTTTGCCCTGATTCGCACTATTCGTGA
TCAATTGCGGCTATTTGGACCAGAAGAAGCAGCGGTATTAGTTGATATTGAGTTTGATAGTACAGAAATAGCCATTATTA
TCAATGGTATCCCACAATTTTCTCGAACAGTACCGATTGGCACTTATCAACTCCAAACTGCATTGTCAAGGGCTATGAAC
TTACCAGCATCACGGGATATGGATATGTTGGAGAGTATGACTATTCCCACAACTTCACCAGATTCAGCCCATAGTGGAGT
GACAGGTAGTAATCCGGGGATGGCTTCTATGTTGAGAGTTCTCGGAGAATTAGCTGATGAATTGCGTCGTTCCATTGATT
TTTACCTCAATCAAAGTGAAAATCTGGAAGTCGTGCAGATTCTTTTAGCCGGTCCTGGGGGAGGATTACCACAAATTGAT
GAGTTTTTCACTCAAAGATTGAGTTTACCAACTACCCAAATAGATCCAATTACTTCTTTGTCTTTGGAGGTAGATGCTGA
AAAATATCCTTTAATTAAACGTCCTGGGTTGGGTATTGTCCTGGGTTTAGGAATGCGAGGGTTGTAA
ATGGTTAAAGCCTTCACTAGTTTCTTTGGTAAATCCAGTAAAGGTATTGGTATTGAACTAGCGCCGGAACGGGTAAACGT
AGTCCAACTACATAAACACCGCCAAAACTTAAAAATCGAATCTTTGACAACAGTACCAGTACCAGAAGGTATATTTATTG
ATGGTCAAATTGCTGATTCTGTGGGAATGTCCGAAATTATTCAGCAAGCGATCGCCGAAAGCAAAACTAAAGCTACCCGT
GTTATTACTTGTATCCCAGGACGAGAATCCATTATCCGGTTGATTCCTGTCCCATCTGAATTAGATGACAAGGAGTTGCG
GGACATAATACTCAACCATGAAGCATCTTTATATTTACCCTATCCCAGAGAAGAAGCTGATGTTGATTATCAAAAACTTG
GGGACTTTATAGACGAAGACGGCATTGAGAAAGTGCAGGTTTTGTTAGTTGCGACTCGTAAAGATGTCACGCAAACCTAT
TTAAATACCTTTGAACAGGCAGGATTAACAGTTGATATCTTAGAAATTAACAGCTTTGCCCTGATTCGCACTATTCGTGA
TCAATTGCGGCTATTTGGACCAGAAGAAGCAGCGGTATTAGTTGATATTGAGTTTGATAGTACAGAAATAGCCATTATTA
TCAATGGTATCCCACAATTTTCTCGAACAGTACCGATTGGCACTTATCAACTCCAAACTGCATTGTCAAGGGCTATGAAC
TTACCAGCATCACGGGATATGGATATGTTGGAGAGTATGACTATTCCCACAACTTCACCAGATTCAGCCCATAGTGGAGT
GACAGGTAGTAATCCGGGGATGGCTTCTATGTTGAGAGTTCTCGGAGAATTAGCTGATGAATTGCGTCGTTCCATTGATT
TTTACCTCAATCAAAGTGAAAATCTGGAAGTCGTGCAGATTCTTTTAGCCGGTCCTGGGGGAGGATTACCACAAATTGAT
GAGTTTTTCACTCAAAGATTGAGTTTACCAACTACCCAAATAGATCCAATTACTTCTTTGTCTTTGGAGGTAGATGCTGA
AAAATATCCTTTAATTAAACGTCCTGGGTTGGGTATTGTCCTGGGTTTAGGAATGCGAGGGTTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilM | Synechocystis sp. PCC 6803 |
63.934 |
99.457 |
0.636 |