Detailed information
Bioinformatically predicted
Overview
| Name | comQ | Type | Machinery gene |
| Locus tag | FXN59_RS10435 | Genome accession | NZ_CP043004 |
| Coordinates | 2011631..2011933 (-) | Length | 100 a.a. |
| NCBI ID | WP_005554585.1 | Uniprot ID | A0A142G259 |
| Organism | Aggregatibacter actinomycetemcomitans strain HK_973 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2006631..2016933
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FXN59_RS10420 (FXN59_10420) | - | 2007304..2007741 (+) | 438 | WP_151294892.1 | DNA polymerase III subunit psi | - |
| FXN59_RS10425 (FXN59_10425) | rimI | 2007751..2008194 (+) | 444 | WP_005557888.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| FXN59_RS10430 (FXN59_10430) | recC | 2008196..2011585 (-) | 3390 | WP_151294894.1 | exodeoxyribonuclease V subunit gamma | - |
| FXN59_RS10435 (FXN59_10435) | comQ | 2011631..2011933 (-) | 303 | WP_005554585.1 | DUF5374 domain-containing protein | Machinery gene |
| FXN59_RS10440 (FXN59_10440) | - | 2011908..2012603 (-) | 696 | WP_148327089.1 | DUF2572 family protein | - |
| FXN59_RS10445 (FXN59_10445) | - | 2012600..2013343 (-) | 744 | Protein_2006 | hypothetical protein | - |
| FXN59_RS10450 (FXN59_10450) | comN | 2013330..2013851 (-) | 522 | WP_187372986.1 | type II secretion system protein | Machinery gene |
| FXN59_RS10465 (FXN59_10465) | pal | 2014557..2015024 (-) | 468 | WP_005544510.1 | peptidoglycan-associated lipoprotein Pal | - |
| FXN59_RS10470 (FXN59_10470) | tolB | 2015039..2016319 (-) | 1281 | WP_005544509.1 | Tol-Pal system beta propeller repeat protein TolB | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11675.61 Da Isoelectric Point: 10.6243
>NTDB_id=380148 FXN59_RS10435 WP_005554585.1 2011631..2011933(-) (comQ) [Aggregatibacter actinomycetemcomitans strain HK_973]
MILRLRKIDYKGMSLLSLLVTLSLFSGLFLTFNQWGNVQRKSAVEIYQRFQAIQIAENQHQRRFLGLPCESQVQQNQIRF
QVVCSQNQVSVKYPRGEISL
MILRLRKIDYKGMSLLSLLVTLSLFSGLFLTFNQWGNVQRKSAVEIYQRFQAIQIAENQHQRRFLGLPCESQVQQNQIRF
QVVCSQNQVSVKYPRGEISL
Nucleotide
Download Length: 303 bp
>NTDB_id=380148 FXN59_RS10435 WP_005554585.1 2011631..2011933(-) (comQ) [Aggregatibacter actinomycetemcomitans strain HK_973]
ATGATTTTGCGGTTACGGAAAATTGATTACAAAGGCATGAGCCTATTGTCTTTGTTGGTTACGTTGAGCTTATTCAGCGG
GCTTTTTCTCACCTTCAATCAATGGGGCAATGTGCAACGAAAAAGTGCGGTGGAAATTTATCAGCGTTTTCAAGCCATCC
AAATTGCCGAAAATCAGCATCAACGCCGTTTCCTTGGATTGCCTTGTGAATCGCAGGTGCAGCAAAATCAAATTCGTTTT
CAGGTGGTTTGTTCGCAAAATCAGGTGTCGGTGAAATATCCTCGCGGTGAAATTAGTTTATAA
ATGATTTTGCGGTTACGGAAAATTGATTACAAAGGCATGAGCCTATTGTCTTTGTTGGTTACGTTGAGCTTATTCAGCGG
GCTTTTTCTCACCTTCAATCAATGGGGCAATGTGCAACGAAAAAGTGCGGTGGAAATTTATCAGCGTTTTCAAGCCATCC
AAATTGCCGAAAATCAGCATCAACGCCGTTTCCTTGGATTGCCTTGTGAATCGCAGGTGCAGCAAAATCAAATTCGTTTT
CAGGTGGTTTGTTCGCAAAATCAGGTGTCGGTGAAATATCCTCGCGGTGAAATTAGTTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comQ | Haemophilus influenzae Rd KW20 |
56.122 |
98 |
0.55 |