Detailed information    

insolico Bioinformatically predicted

Overview

Name   rec2   Type   Machinery gene
Locus tag   FXN59_RS07155 Genome accession   NZ_CP043004
Coordinates   1357490..1359919 (-) Length   809 a.a.
NCBI ID   WP_151294548.1    Uniprot ID   -
Organism   Aggregatibacter actinomycetemcomitans strain HK_973     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1352490..1364919
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FXN59_RS07135 (FXN59_07135) kdsB 1353730..1354503 (-) 774 WP_148325580.1 3-deoxy-manno-octulosonate cytidylyltransferase -
  FXN59_RS07140 (FXN59_07140) - 1354505..1354684 (-) 180 WP_151294546.1 Trm112 family protein -
  FXN59_RS07145 (FXN59_07145) lpxK 1354702..1355676 (-) 975 WP_148326886.1 tetraacyldisaccharide 4'-kinase -
  FXN59_RS07150 (FXN59_07150) msbA 1355695..1357443 (-) 1749 WP_148326885.1 lipid A ABC transporter ATP-binding protein/permease MsbA -
  FXN59_RS07155 (FXN59_07155) rec2 1357490..1359919 (-) 2430 WP_151294548.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  FXN59_RS07160 (FXN59_07160) dksA 1360217..1360654 (+) 438 WP_005542366.1 RNA polymerase-binding protein DksA -
  FXN59_RS07170 (FXN59_07170) pcnB 1360771..1362237 (+) 1467 WP_233443995.1 polynucleotide adenylyltransferase PcnB -
  FXN59_RS07175 (FXN59_07175) folK 1362230..1362730 (+) 501 WP_148325575.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  FXN59_RS07180 (FXN59_07180) - 1362801..1363163 (-) 363 WP_148325574.1 cupin -

Sequence

Protein


Download         Length: 809 a.a.        Molecular weight: 92207.96 Da        Isoelectric Point: 9.7117

>NTDB_id=380145 FXN59_RS07155 WP_151294548.1 1357490..1359919(-) (rec2) [Aggregatibacter actinomycetemcomitans strain HK_973]
MSVSLDKLAIALIFSGLTLLFLPDRFLLSWQTACYLLLLLCPLMLLAYALRQDKIKQIVMWLLILMIQSAYVHQSAISIL
TQADNLANLPKTVHREFTVEEILHQQHYQTLVIRAKLAENLPEQRIYAQWKLKQPVNPGERYAGNLRLRALSSRLNFDGF
DRQPWYFGKHITAWAEIKSAVKLENVFSLRQTALNQALQQTENLPRQGLLLALGFGERFRLDQKTWQIYQKTNTAHLIAI
SGLHIGLAMMLGFTLARLLQFALPTRYISPTFPILCGFIFALLYSQLAGLAIPTLRAMIALAMLYAIQYWRRYWTVWQFL
LRVIALLIFIDPLMLLSTSFWLSVGAVTCLIVWYQYFPLSLLQWRGHSLANSPWQKVRYVFGLFHLQFGLLWLFTPIQLL
FFNGISLNSFIANVIAVPLYSFVLVPLVLFAVVTQGAWHSWQIANDLAEKITALLTPWQDDWLAISIPHSLWITLCLTFL
FLVALYVIYKPPKPITSTLALSRQHRFKGFHFNPERALSLPLRKSAYCVGGGLIALCCLTLISQSISRPNWQLETLDVGQ
GLATLIVKDGKGVLYDTGPSWKGGSMAQLEILPYLQRQGIDLEWLILSHDDNDHAGGAKDILAMYPHIQLTTASQKRYGS
QNTEKNDRTFCQAGKQWHWQGLHFTVLSPENILPRAENRDSCTLLLTDGTHHILLTGDADLSVEYKILPKLGKIHVLQVG
HHGSKTSTGQALVQHIQPDIALISSGRWNPWHFPHKDVVVRLQQQGSQIYNTAHSGQISLLFYNEEIKIQTARTEFSPWY
RRLIGLSTK

Nucleotide


Download         Length: 2430 bp        

>NTDB_id=380145 FXN59_RS07155 WP_151294548.1 1357490..1359919(-) (rec2) [Aggregatibacter actinomycetemcomitans strain HK_973]
GTGAGCGTTTCGTTGGATAAGTTGGCTATAGCCCTGATTTTTAGCGGTTTAACATTATTGTTTTTGCCCGATCGCTTTTT
ATTATCGTGGCAAACGGCGTGCTATTTACTCCTCTTATTATGTCCACTCATGTTGCTTGCTTATGCCCTGCGACAGGACA
AAATCAAGCAAATAGTAATGTGGCTACTGATCTTGATGATTCAGTCCGCTTACGTCCACCAATCGGCAATTTCCATACTG
ACCCAGGCGGATAATCTTGCCAATCTGCCGAAAACCGTTCACCGCGAATTTACCGTCGAAGAAATTCTACATCAGCAGCA
TTATCAAACCCTGGTTATTCGCGCCAAACTCGCCGAAAATCTTCCCGAACAACGTATTTACGCGCAATGGAAACTCAAGC
AACCAGTCAACCCCGGCGAACGTTACGCAGGCAATTTACGCTTGCGAGCGCTTTCTTCCCGCCTGAATTTTGACGGTTTT
GACCGCCAGCCATGGTATTTCGGCAAGCACATCACCGCGTGGGCAGAGATTAAAAGTGCGGTCAAATTGGAAAACGTTTT
TTCGTTACGCCAAACCGCTCTCAATCAAGCCTTACAACAAACGGAGAATTTACCCCGACAAGGCTTGTTGCTGGCACTCG
GTTTTGGCGAACGTTTCCGCTTAGACCAAAAAACTTGGCAAATTTATCAAAAAACAAATACGGCGCATTTAATTGCTATT
TCAGGGCTGCATATCGGACTGGCGATGATGCTGGGTTTTACCTTGGCGCGTCTACTGCAATTTGCCTTGCCGACGCGTTA
CATCAGCCCGACATTTCCGATTCTGTGCGGATTCATTTTTGCGCTGTTATACAGCCAACTGGCGGGGCTTGCTATTCCGA
CTTTACGCGCCATGATTGCGTTAGCCATGCTCTACGCGATTCAGTATTGGCGACGATATTGGACGGTATGGCAATTCTTG
TTAAGAGTGATTGCCTTGCTGATTTTTATCGATCCGCTCATGTTGCTTTCCACCAGCTTTTGGTTGTCAGTGGGCGCAGT
GACCTGTCTGATTGTTTGGTATCAGTATTTTCCGTTGTCTCTATTGCAATGGCGCGGCCATTCCCTTGCCAATTCGCCGT
GGCAGAAAGTGCGGTATGTTTTCGGATTGTTTCATTTGCAATTCGGTCTGCTCTGGCTGTTCACGCCCATTCAGCTGTTG
TTTTTTAACGGCATTTCGTTAAATAGTTTTATCGCCAATGTCATCGCCGTGCCGCTTTATAGCTTCGTTTTGGTCCCGTT
GGTGTTATTTGCCGTAGTCACCCAAGGTGCGTGGCATTCGTGGCAGATCGCCAACGATTTGGCGGAAAAAATCACCGCAC
TTTTGACGCCTTGGCAGGATGACTGGTTGGCGATTTCCATTCCGCACAGTTTATGGATAACCCTATGTTTAACCTTTCTT
TTTTTAGTGGCGCTCTATGTTATTTATAAACCGCCCAAACCGATAACATCCACTTTAGCCTTGTCAAGGCAGCACCGCTT
TAAAGGATTTCATTTTAATCCGGAACGCGCCTTAAGTTTACCGTTACGAAAAAGCGCTTATTGCGTGGGCGGTGGGCTGA
TTGCCCTGTGTTGCCTGACGTTAATTTCTCAGTCTATTTCACGTCCGAACTGGCAATTGGAAACCTTGGACGTGGGGCAA
GGGTTGGCAACTTTAATCGTGAAAGACGGCAAAGGCGTGCTTTACGATACCGGCCCGAGTTGGAAGGGCGGCAGTATGGC
ACAATTGGAAATTCTGCCTTATTTACAACGGCAAGGCATTGATTTGGAATGGCTGATATTAAGCCATGACGACAACGATC
ACGCAGGTGGTGCCAAAGATATTTTAGCAATGTATCCCCATATTCAACTGACCACCGCTTCACAAAAGCGATATGGTTCC
CAAAACACCGAAAAAAATGACCGCACTTTTTGTCAAGCCGGTAAACAATGGCATTGGCAGGGGTTGCATTTTACCGTGCT
ATCACCGGAGAATATCTTGCCCCGTGCGGAAAATCGGGATTCCTGTACGCTTTTATTAACCGATGGCACGCACCATATTT
TGCTGACGGGCGATGCGGATCTTAGCGTGGAATATAAGATCCTGCCGAAACTTGGCAAAATCCATGTGTTACAAGTGGGG
CATCACGGTAGCAAAACCTCGACGGGGCAGGCATTAGTGCAACATATTCAACCGGACATTGCGCTGATTTCCAGCGGACG
CTGGAACCCATGGCATTTTCCCCATAAAGACGTGGTGGTGCGCCTGCAACAACAAGGATCGCAAATTTATAATACGGCGC
ATAGCGGGCAAATCAGTCTACTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCACTGAATTTTCGCCTTGGTAT
CGCAGATTGATTGGCTTGAGCACGAAATAA

Domains

Predicted by InterproScan.

Competence protein (Competence)

(213-486)

Domain of unknown function (DUF4131) (DUF4131)

(34-179)

Metallo-beta-lactamase superfamily (Lactamase_B)

(557-745)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rec2 Haemophilus influenzae Rd KW20

52.469

100

0.525

Multiple sequence alignment