Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | FVF62_RS15135 | Genome accession | NZ_CP042931 |
| Coordinates | 3166730..3167110 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain ABCR01 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3161730..3172110
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FVF62_RS15105 (FVF62_15295) | tadA | 3161848..3162351 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| FVF62_RS15110 (FVF62_15300) | - | 3162358..3163482 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| FVF62_RS15115 (FVF62_15305) | ung | 3163479..3164192 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| FVF62_RS15120 (FVF62_15310) | - | 3164243..3164839 (-) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| FVF62_RS15125 (FVF62_15315) | gspK | 3165070..3166029 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| FVF62_RS15130 (FVF62_15320) | xcpW | 3166029..3166730 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| FVF62_RS15135 (FVF62_15325) | xcpV | 3166730..3167110 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| FVF62_RS15140 (FVF62_15330) | - | 3167100..3167654 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| FVF62_RS15145 (FVF62_15335) | - | 3167664..3168272 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| FVF62_RS15150 (FVF62_15340) | - | 3168310..3169083 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| FVF62_RS15155 (FVF62_15345) | - | 3169101..3169442 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| FVF62_RS15160 (FVF62_15350) | - | 3169454..3170434 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| FVF62_RS15165 (FVF62_15355) | kdsB | 3170446..3171207 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=379521 FVF62_RS15135 WP_000836911.1 3166730..3167110(-) (xcpV) [Acinetobacter baumannii strain ABCR01]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=379521 FVF62_RS15135 WP_000836911.1 3166730..3167110(-) (xcpV) [Acinetobacter baumannii strain ABCR01]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |