Detailed information NTG0379410

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: FED50_RS02140
• Genome accession: NZ_CP042929
• Coordinates: 97719..99095 (+)
• Length: 458 a.a.
• NCBI ID: WP_001085202.1
• Uniprot ID: -
• Organism: Bacillus cereus strain G1-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 92719..104095

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FED50_RS02120	ctsR	92916..93377 (+)	462	WP_001244565.1	transcriptional regulator CtsR	-
FED50_RS02125	-	93548..94096 (+)	549	WP_000128399.1	UvrB/UvrC motif-containing protein	-
FED50_RS02130	-	94101..95165 (+)	1065	WP_000050842.1	protein arginine kinase	-
FED50_RS02135	clpC	95188..97623 (+)	2436	WP_000971183.1	ATP-dependent protease ATP-binding subunit ClpC	Regulator
FED50_RS02140	radA	97719..99095 (+)	1377	WP_001085202.1	DNA repair protein RadA	Machinery gene
FED50_RS02145	disA	99099..100172 (+)	1074	WP_000392163.1	DNA integrity scanning diadenylate cyclase DisA	-
FED50_RS02150	-	100333..101442 (+)	1110	WP_059303358.1	PIN/TRAM domain-containing protein	-
FED50_RS02155	ispD	101459..102139 (+)	681	WP_088053699.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
FED50_RS02160	ispF	102256..102732 (+)	477	WP_000488386.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-

Sequence

Protein

• Length: 458 a.a.
• Molecular weight: 49844.48 Da
• Isoelectric Point: 7.1422

>NTDB_id=379410 FED50_RS02140 WP_001085202.1 97719..99095(+) (radA) [Bacillus cereus strain G1-1]
MAKKKTKFTCQECGYQSPKYMGKCPGCGQWNSLVEEMEPVVSSRRLNYANAIQTEVTKPRRLTEVETKSEARIETKFQEF
NRVLGGGIVDGSLVLIGGDPGIGKSTLLLQISSQLADASYDVLYISGEESAKQIKLRADRLHVNGSNLFVVSETDLQRIA
AHIEEMNPAFVVIDSIQTIHLPEVTSAPGSVAQVRECTAELMKLAKTKGIPIFIVGHVTKEGAIAGPRMLEHMVDAVLYF
EGDRHHTYRILRAVKNRFGSTNEMGIFEMKELGLAEVLNPSEIFLEERPVGVAGSTVVASMEGTRPVLVEIQALISPTSF
GNPRRMATGIDHNRVSLIMAVLEKRTGLLLQNQDAYLKVAGGLKLDEPAIDLAVALSIASSFRDKSTAPTDAVIGEVGLT
GEIRRVSRIEQRVQEAAKLGFQRAIIPRKNLGGWTIPEGIEVVGVSNLGEALRLTLGG

Nucleotide

• Length: 1377 bp

>NTDB_id=379410 FED50_RS02140 WP_001085202.1 97719..99095(+) (radA) [Bacillus cereus strain G1-1]
ATGGCTAAAAAGAAAACAAAATTCACATGTCAAGAGTGTGGTTATCAATCACCAAAATATATGGGTAAATGTCCAGGGTG
TGGTCAATGGAATTCGCTTGTTGAAGAGATGGAACCCGTTGTATCATCCAGACGCCTAAATTATGCAAATGCAATTCAAA
CAGAAGTAACAAAACCAAGACGTCTTACAGAAGTAGAAACAAAGTCTGAGGCACGTATTGAAACGAAATTTCAAGAGTTT
AACCGTGTACTAGGTGGCGGAATTGTAGATGGATCTTTAGTACTTATTGGTGGGGACCCTGGGATTGGAAAATCAACGTT
ATTATTACAGATTTCCTCGCAATTAGCAGATGCTTCATATGATGTATTGTATATATCAGGTGAGGAGTCAGCAAAGCAGA
TTAAACTTCGTGCAGATCGTTTACATGTAAATGGTAGTAATCTATTTGTTGTATCAGAGACAGATTTACAGCGTATTGCA
GCACATATTGAAGAGATGAATCCTGCTTTTGTTGTTATTGATTCTATTCAAACGATACATTTACCTGAGGTGACATCAGC
TCCTGGTAGTGTGGCGCAAGTACGTGAATGTACAGCAGAATTAATGAAACTTGCAAAAACAAAGGGAATCCCAATTTTCA
TCGTAGGACATGTGACAAAAGAAGGTGCAATTGCGGGACCGCGTATGCTAGAACATATGGTCGATGCAGTTCTTTACTTT
GAAGGAGATCGACACCATACATATCGTATTTTACGAGCTGTAAAGAATCGTTTTGGTTCTACGAATGAAATGGGTATCTT
TGAAATGAAAGAACTTGGCCTTGCAGAAGTCTTAAATCCTTCTGAAATTTTCCTTGAGGAAAGACCAGTTGGAGTTGCAG
GTTCAACAGTAGTTGCCTCAATGGAAGGAACAAGACCAGTTTTAGTAGAAATACAGGCATTAATTTCCCCTACTAGTTTT
GGAAATCCTCGAAGAATGGCGACAGGAATTGATCATAATCGTGTCTCGCTTATTATGGCGGTACTAGAGAAAAGAACAGG
TTTACTATTACAAAATCAAGATGCGTATTTAAAAGTAGCTGGTGGTTTGAAATTAGACGAACCGGCAATTGATTTAGCTG
TCGCCTTAAGTATAGCTTCAAGTTTTAGAGATAAATCTACGGCACCAACTGATGCGGTAATAGGAGAAGTTGGATTAACT
GGAGAAATAAGAAGAGTATCAAGAATTGAACAACGTGTACAAGAAGCAGCTAAATTAGGATTTCAACGTGCTATCATTCC
TAGAAAAAATTTAGGGGGATGGACAATTCCAGAGGGGATTGAGGTTGTAGGTGTTTCTAATTTGGGAGAAGCGCTTCGTT
TGACATTAGGAGGCTAG

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (363-430)

• AAA domain (AAA_25) (60-222)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	74.728	100	0.749
radA	Streptococcus pneumoniae Rx1	64.018	98.908	0.633
radA	Streptococcus pneumoniae D39	64.018	98.908	0.633
radA	Streptococcus pneumoniae R6	64.018	98.908	0.633
radA	Streptococcus pneumoniae TIGR4	64.018	98.908	0.633
radA	Streptococcus mitis SK321	64.018	98.908	0.633
radA	Streptococcus mitis NCTC 12261	63.797	98.908	0.631