Detailed information    

insolico Bioinformatically predicted

Overview

Name   sinR   Type   Regulator
Locus tag   BACI_RS06625 Genome accession   NC_014335
Coordinates   1234610..1234933 (-) Length   107 a.a.
NCBI ID   WP_000578883.1    Uniprot ID   A0A150B540
Organism   Bacillus cereus biovar anthracis str. CI     
Function   repression of rok; repression of degU; repression of spo0A (predicted from homology)   
Competence regulation

Genomic Context

Location: 1229610..1239933
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BACI_RS06600 (BACI_c13110) - 1229888..1231174 (+) 1287 WP_000247004.1 D-alanyl-D-alanine carboxypeptidase family protein -
  BACI_RS06605 (BACI_c13120) - 1231369..1231938 (+) 570 WP_000767813.1 signal peptidase I -
  BACI_RS06610 (BACI_c13130) - 1231999..1232589 (+) 591 WP_000172842.1 TasA family protein -
  BACI_RS06615 (BACI_c13140) - 1232745..1233518 (+) 774 WP_000917475.1 DUF4047 domain-containing protein -
  BACI_RS06620 (BACI_c13150) calY 1233941..1234534 (+) 594 WP_000053731.1 biofilm matrix protein CalY -
  BACI_RS06625 (BACI_c13160) sinR 1234610..1234933 (-) 324 WP_000578883.1 helix-turn-helix domain-containing protein Regulator
  BACI_RS06630 - 1235013..1235147 (-) 135 WP_000276217.1 anti-repressor SinI family protein -
  BACI_RS06635 (BACI_c13170) inhA1 1235491..1237878 (+) 2388 WP_001035915.1 M6 family metalloprotease immune inhibitor InhA1 -
  BACI_RS06640 (BACI_c13180) - 1238050..1239417 (+) 1368 WP_000116801.1 aldehyde dehydrogenase -

Sequence

Protein


Download         Length: 107 a.a.        Molecular weight: 12358.20 Da        Isoelectric Point: 9.6248

>NTDB_id=37910 BACI_RS06625 WP_000578883.1 1234610..1234933(-) (sinR) [Bacillus cereus biovar anthracis str. CI]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKENHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTKWKQNQK

Nucleotide


Download         Length: 324 bp        

>NTDB_id=37910 BACI_RS06625 WP_000578883.1 1234610..1234933(-) (sinR) [Bacillus cereus biovar anthracis str. CI]
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGTGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTCTACTTCATGATGAAACAACAAAGGAAAATCACTTAGACTCCGAATGGACACAACTCGTT
AAAGATGCGATGAGCTCCGGCGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(6-60)

Anti-repressor SinI (SinI)

(72-99)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A150B540

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sinR Bacillus subtilis subsp. subtilis str. 168

67.89

100

0.692

Multiple sequence alignment