Detailed information NTG0037904

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: BACI_RS06080
• Genome accession: NC_014335
• Coordinates: 1135247..1137847 (+)
• Length: 866 a.a.
• NCBI ID: WP_000365371.1
• Uniprot ID: -
• Organism: Bacillus cereus biovar anthracis str. CI
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1130247..1142847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BACI_RS06035 (BACI_c11990)	-	1130705..1130968 (+)	264	WP_001199903.1	hypothetical protein	-
BACI_RS06040 (BACI_c12000)	prsA	1131009..1131866 (-)	858	WP_001214193.1	peptidylprolyl isomerase PrsA	-
BACI_RS06045	-	1131997..1132128 (-)	132	WP_001120845.1	DUF3941 domain-containing protein	-
BACI_RS06050 (BACI_c12010)	-	1132229..1133086 (+)	858	WP_000364442.1	YitT family protein	-
BACI_RS06055 (BACI_c12020)	-	1133112..1133309 (-)	198	WP_000527393.1	DUF3813 domain-containing protein	-
BACI_RS06060	-	1133310..1133450 (-)	141	WP_000516816.1	hypothetical protein	-
BACI_RS06065 (BACI_c12030)	-	1133556..1134365 (-)	810	WP_001041235.1	Cof-type HAD-IIB family hydrolase	-
BACI_RS06075 (BACI_c12040)	-	1134857..1135036 (+)	180	WP_000531421.1	YjzC family protein	-
BACI_RS06080 (BACI_c12050)	clpC	1135247..1137847 (+)	2601	WP_000365371.1	ATP-dependent chaperone ClpB	Regulator
BACI_RS06085 (BACI_c12060)	-	1137881..1138063 (-)	183	WP_001211116.1	YjzD family protein	-
BACI_RS06090 (BACI_c12070)	-	1138220..1138954 (+)	735	WP_000028701.1	hydrolase	-
BACI_RS06095 (BACI_c12080)	-	1138984..1139856 (+)	873	WP_041183855.1	NAD(P)-dependent oxidoreductase	-
BACI_RS06100 (BACI_c12090)	comZ	1139910..1140086 (+)	177	WP_009879752.1	ComZ family protein	Regulator
BACI_RS06105 (BACI_c12100)	fabH	1140320..1141252 (+)	933	WP_001100536.1	beta-ketoacyl-ACP synthase III	-
BACI_RS06110 (BACI_c12110)	fabF	1141284..1142522 (+)	1239	WP_000412652.1	beta-ketoacyl-ACP synthase II	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97541.53 Da
• Isoelectric Point: 5.1557

>NTDB_id=37904 BACI_RS06080 WP_000365371.1 1135247..1137847(+) (clpC) [Bacillus cereus biovar anthracis str. CI]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEALKQGAENLIKKKPSVTGSGAE
AGKLYITGALQQLLVRAGKEAEKLQDDYISIEHVLLAFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT
VQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=37904 BACI_RS06080 WP_000365371.1 1135247..1137847(+) (clpC) [Bacillus cereus biovar anthracis str. CI]
ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTGTCTCATCATCATCA
AGAAGTAGATACTGTTCATCTCTTGTTTACATTATTAGAAGAGCAAGATGGGTTAGCAGTACGTATTTTTCAAAAAATGA
ATGTCGATATAGAAGCGTTAAAACAAGGCGCCGAAAATTTAATTAAGAAAAAGCCTTCCGTAACGGGAAGCGGTGCAGAA
GCAGGTAAATTATATATAACAGGTGCTCTGCAACAATTACTTGTAAGAGCGGGAAAAGAAGCAGAGAAATTGCAAGATGA
CTACATTTCAATTGAACATGTATTGCTTGCTTTTACTGAAGAAAAAGGCGATATAAATCAATTATTTACAAGATTTCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGTCGTGATTTAGTGGCGGAAGTAAGAGCGGGGAAAATTGACCCTGTTATTGGCCGCGA
TAGTGAAATTCGCCGCGTAATCCGTATTCTTTCACGTAAAACGAAAAACAACCCGGTTTTAATTGGGGAACCGGGTGTAG
GTAAAACAGCAATCGTTGAAGGGTTAGCACAGCGTATTGTGAAAAAGGACGTACCAGAAGGATTAAAAGATAGAACAATT
TTTGCGTTAGATATGAGTGCGCTTGTAGCCGGTGCGAAATTCCGCGGTGAGTTTGAGGAGCGTCTCCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGTCGTATTTTACTATTCATTGATGAACTTCACACAATCGTCGGCGCTGGTAAAACAGAAG
GCGCAATGGATGCAGGAAATATGTTAAAACCGATGCTTGCGCGTGGTGAACTGCATTGTATCGGGGCGACGACGTTAGAT
GAATATCGTAAATATATTGAGAAAGATCCAGCGCTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACTGTTGA
AGATACAATTTCTATTTTACGTGGTTTAAAAGAGCGCTTTGAAATTTATCACGGTGTAAATATTCATGACCGCGCGATTG
TAGCAGCATCAGTTTTATCAGATCGGTATATTTCGGATCGTTTCTTACCGGATAAAGCCATTGATCTTGTTGACGAAGCG
TGCGCAACAATTCGTACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGCTGGAAAT
TGAAGAAGCAGCTCTTGGAAAAGAGAAAGACTTTGGTAGCCAAGAACGTCTAAAAACATTGCAACGTGAATTATCGGATT
TAAAAGAAGTGGCAAGTGGCATGAGAGCCAAATGGGAGAAAGAAAAAGAAGATATTCACAAAGTTCGTGACTTACGTGAA
CATTTAGAGCGTCTGCGCCGTGAATTAGAAGAAGCAGAAGGTAATTACGACTTAAATAGAGCAGCGGAACTTCGCCACGG
AAAAATTCCTGCAATTGAAAAAGAGTTAAAAGAAGCAGAAGAAATGGGCGCGAATAATAAACAAGAAAATCGTTTATTAC
GTGAGGAAGTAAGTGAAGAAGAGATTGCTGATATTGTTTCACGCTGGACTGGTATTCCTGTCGCAAAACTCGTTGAAGGT
GAACGTGAGAAATTATTACGATTAGAGCAAATTTTATCAGAGCGTGTTATCGGACAAGAAGAAGCGGTAAGCCTAGTATC
AGACGCAGTTCTTCGTGCTCGTGCTGGTATTAAAGACCCGAACCGTCCAATTGGTTCCTTCATCTTCTTAGGACCGACTG
GTGTTGGTAAAACAGAACTTGCAAAAACGTTGGCGCAGTCTTTATTTGATAGTGAAGAGCAAATGATTCGTATTGATATG
TCTGAGTACATGGAGAAACACGCTGTGTCACGCTTAATTGGTGCACCTCCTGGATATGTTGGATATGAAGAGGGCGGTCA
ATTAACAGAAGCAGTAAGACGTAAACCGTATTCTGTTATTTTGTTAGATGAAATCGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGATGACGGACGCATTACAGATTCGCAAGGACGTACAGTAGACTTTAAAAACACAGTTATT
ATTATGACGTCAAATATTGGATCTGCTCATTTATTAGATGGATTAGAAGAAGATGGCTCTATTAAAGAAGAATCAAGAGA
ACTTGTAATGGGGCAATTAAGAGGGCATTTCCGACCAGAGTTTTTAAACCGCGTCGACGAAATTATTTTATTCAAACCTC
TTACAACGAATGAAATTAAAGGTATTGTTGATAAAATTGTAAAAGAATTACAAGGTCGTTTAGCTGACCGTCATATTACG
GTACAATTAACAGACGCGGCAAAAGAATTTGTTGTAGAAGCTGGCTTTGATCCGATGTACGGAGCTCGTCCATTAAAACG
ATATGTACAGCGTCAAGTTGAAACGAAATTAGCGAGAGAATTAATTGCAGGTACGATTACTGACAATAGTCATGTAGTGG
TTGATGTAGAAAATAACGAATTAGTCGTTCATGTGAAATAA

Domains

Predicted by InterproScan.

• AAA lid domain (AAA_lid_9) (345-447)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.543	100	0.48
clpC	Lactococcus lactis subsp. cremoris KW2	47.199	82.448	0.389