Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   BAA1790NC_RS18075 Genome accession   NZ_CP042841
Coordinates   3768477..3769631 (+) Length   384 a.a.
NCBI ID   WP_000755268.1    Uniprot ID   A0A9P3CTL8
Organism   Acinetobacter baumannii strain ATCC BAA-1790     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3763477..3774631
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAA1790NC_RS18050 (BAA1790NC_3482) - 3763628..3764842 (+) 1215 WP_001177962.1 oxygenase MpaB family protein -
  BAA1790NC_RS18055 - 3764912..3765118 (-) 207 WP_000182542.1 hypothetical protein -
  BAA1790NC_RS18060 (BAA1790NC_3483) - 3765172..3767286 (-) 2115 WP_001120667.1 TonB-dependent copper receptor -
  BAA1790NC_RS18065 (BAA1790NC_3484) - 3767359..3767787 (-) 429 WP_000231984.1 DUF2946 family protein -
  BAA1790NC_RS18070 (BAA1790NC_3485) def 3767824..3768354 (-) 531 WP_001196539.1 peptide deformylase -
  BAA1790NC_RS18075 (BAA1790NC_3486) tsaP 3768477..3769631 (+) 1155 WP_000755268.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  BAA1790NC_RS18080 (BAA1790NC_3487) dprA 3769652..3770782 (+) 1131 WP_002019199.1 DNA-processing protein DprA Machinery gene
  BAA1790NC_RS18085 (BAA1790NC_3488) - 3770833..3771402 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  BAA1790NC_RS18090 (BAA1790NC_3489) - 3771794..3772714 (-) 921 WP_002023238.1 DMT family transporter -
  BAA1790NC_RS18095 (BAA1790NC_3490) - 3772820..3773470 (-) 651 WP_001984979.1 TetR/AcrR family transcriptional regulator -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42364.30 Da        Isoelectric Point: 8.5816

>NTDB_id=378894 BAA1790NC_RS18075 WP_000755268.1 3768477..3769631(+) (tsaP) [Acinetobacter baumannii strain ATCC BAA-1790]
MKKVFNGMVNFHALGIKKHLLALALCTGIAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=378894 BAA1790NC_RS18075 WP_000755268.1 3768477..3769631(+) (tsaP) [Acinetobacter baumannii strain ATCC BAA-1790]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCCTTGGCGCTCTGTAC
AGGTATCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCACTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTGTAGGTATTATTCGCCGCTACACTGGTCAAACCACAAACC
TACAACCACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCGGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGACTCAATTACCAACACACCTTATATTGTTGGTACAGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAGCTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAACAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGTTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGACCGCGGTACAACTCAGGGCATTCAAGTAGGTCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTAATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

99.219

100

0.992


Multiple sequence alignment