Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | BAA1790NC_RS01645 | Genome accession | NZ_CP042841 |
| Coordinates | 350394..350819 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain ATCC BAA-1790 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 345394..355819
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAA1790NC_RS01635 (BAA1790NC_0323) | pilY1 | 346048..349902 (+) | 3855 | WP_000768966.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| BAA1790NC_RS01640 (BAA1790NC_0324) | pilY2 | 349915..350397 (+) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| BAA1790NC_RS01645 (BAA1790NC_0325) | pilE | 350394..350819 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| BAA1790NC_RS01650 (BAA1790NC_0326) | rpsP | 350966..351217 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| BAA1790NC_RS01655 (BAA1790NC_0327) | rimM | 351237..351785 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| BAA1790NC_RS01660 (BAA1790NC_0328) | trmD | 351831..352571 (+) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| BAA1790NC_RS01665 (BAA1790NC_0329) | rplS | 352779..353147 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| BAA1790NC_RS01670 (BAA1790NC_0330) | - | 353199..354140 (-) | 942 | WP_085946156.1 | triacylglycerol lipase | - |
| BAA1790NC_RS01675 (BAA1790NC_0331) | - | 354255..355289 (-) | 1035 | WP_001189451.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=378865 BAA1790NC_RS01645 WP_000788342.1 350394..350819(+) (pilE) [Acinetobacter baumannii strain ATCC BAA-1790]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=378865 BAA1790NC_RS01645 WP_000788342.1 350394..350819(+) (pilE) [Acinetobacter baumannii strain ATCC BAA-1790]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |