Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   FSZ17_RS08160 Genome accession   NZ_CP042593
Coordinates   1724048..1725007 (+) Length   319 a.a.
NCBI ID   WP_057774232.1    Uniprot ID   A0A5B8Z2H6
Organism   Cytobacillus dafuensis strain FJAT-25496     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1719048..1730007
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSZ17_RS08145 (FSZ17_08145) - 1721908..1722099 (-) 192 WP_057774241.1 DUF2929 family protein -
  FSZ17_RS08150 (FSZ17_08150) - 1722275..1723015 (+) 741 WP_057774238.1 hypothetical protein -
  FSZ17_RS08155 (FSZ17_08155) - 1723104..1723928 (+) 825 WP_057774235.1 hypothetical protein -
  FSZ17_RS08160 (FSZ17_08160) med 1724048..1725007 (+) 960 WP_057774232.1 BMP family ABC transporter substrate-binding protein Regulator
  FSZ17_RS08165 (FSZ17_08165) comZ 1725034..1725228 (+) 195 WP_057774231.1 ComZ family protein Regulator
  FSZ17_RS08170 (FSZ17_08170) - 1725413..1726345 (+) 933 WP_057774229.1 beta-ketoacyl-ACP synthase III -
  FSZ17_RS08175 (FSZ17_08175) fabF 1726407..1727645 (+) 1239 WP_057774226.1 beta-ketoacyl-ACP synthase II -
  FSZ17_RS08180 (FSZ17_08180) - 1727772..1728611 (+) 840 WP_228460305.1 DUF2268 domain-containing protein -
  FSZ17_RS08185 (FSZ17_08185) - 1728933..1729916 (+) 984 WP_057774223.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 319 a.a.        Molecular weight: 35551.04 Da        Isoelectric Point: 4.4280

>NTDB_id=378576 FSZ17_RS08160 WP_057774232.1 1724048..1725007(+) (med) [Cytobacillus dafuensis strain FJAT-25496]
MQKLFAQFGILLLSLLLLTSCGQAMSSGNLKKAGLLIPDTINDQVWGTKGYKGMLKIQSHHNIDVYYKEGMNSQLVVERA
VKEFDQKGVNIIFGHGNEYAEYFNEISPKYPNIHFVSFNGNAENSNTTSLNFEAYAMGFFGGMIAGHMTKTDTVGIIAAY
EWQPEIEGFYEGANFENKDVNVIIEYVGNWDNDKKAIELLDKVFAKGVDVVYPAGDGYNVPVIEKVKEEGHYAIGYISDQ
SDLGESAVLTSTVQHVDVLYELVADMFDKGELKSGNLSFDFQDDVITLGKFSSDVDQEFIDKINKAIEDYKKTGKLPNE

Nucleotide


Download         Length: 960 bp        

>NTDB_id=378576 FSZ17_RS08160 WP_057774232.1 1724048..1725007(+) (med) [Cytobacillus dafuensis strain FJAT-25496]
ATGCAAAAATTATTTGCACAATTTGGGATTCTTCTTTTAAGCCTTCTTTTATTGACCTCCTGTGGACAAGCAATGTCCTC
AGGTAATCTTAAGAAAGCAGGCTTACTAATCCCTGATACTATAAATGATCAAGTGTGGGGAACGAAGGGCTATAAAGGAA
TGTTAAAGATTCAATCCCACCATAATATAGATGTATATTATAAAGAGGGCATGAATTCACAATTGGTTGTGGAACGTGCT
GTTAAAGAATTTGACCAAAAGGGTGTTAACATCATTTTCGGTCATGGAAATGAATATGCGGAATATTTTAATGAAATATC
TCCAAAGTATCCAAATATTCATTTTGTTAGCTTCAACGGAAATGCTGAAAACTCGAATACAACAAGTTTAAATTTTGAAG
CATATGCAATGGGCTTTTTTGGCGGAATGATCGCTGGACATATGACAAAAACAGATACCGTTGGAATCATTGCTGCTTAT
GAGTGGCAGCCAGAAATCGAAGGCTTTTATGAAGGGGCAAATTTTGAGAACAAAGACGTTAATGTCATAATTGAATATGT
CGGAAATTGGGATAATGATAAAAAGGCAATTGAACTTTTGGATAAAGTATTTGCAAAAGGTGTGGATGTTGTTTACCCTG
CAGGGGATGGCTATAATGTTCCCGTAATTGAAAAGGTCAAAGAAGAAGGACACTATGCCATTGGGTATATATCAGACCAA
TCAGATCTTGGAGAATCTGCTGTATTGACAAGTACGGTTCAGCATGTGGATGTTCTATATGAATTAGTGGCAGATATGTT
TGATAAAGGGGAACTAAAATCCGGAAATCTTTCATTCGATTTTCAAGATGATGTCATCACTTTAGGGAAATTTAGTTCTG
ACGTGGATCAAGAGTTTATTGATAAAATAAATAAAGCAATTGAAGACTATAAAAAAACGGGAAAACTACCTAACGAATAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(31-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5B8Z2H6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

51.911

98.433

0.511

Multiple sequence alignment