Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | FR761_RS17700 | Genome accession | NZ_CP042556 |
| Coordinates | 3627033..3627506 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214065.1 | Uniprot ID | N9K1Q3 |
| Organism | Acinetobacter baumannii strain E47 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3622033..3632506
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FR761_RS17685 (FR761_17685) | pilX | 3624662..3625480 (-) | 819 | WP_000149376.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| FR761_RS17690 (FR761_17690) | pilW | 3625477..3626478 (-) | 1002 | WP_000079197.1 | PilW family protein | Machinery gene |
| FR761_RS17695 (FR761_17695) | pilV | 3626479..3627039 (-) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| FR761_RS17700 (FR761_17700) | fimU | 3627033..3627506 (-) | 474 | WP_001214065.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| FR761_RS17705 (FR761_17705) | ispH | 3627676..3628626 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| FR761_RS17710 (FR761_17710) | gmk | 3628749..3629378 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| FR761_RS17715 (FR761_17715) | rpoZ | 3629451..3629729 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| FR761_RS17720 (FR761_17720) | - | 3629768..3629898 (+) | 131 | Protein_3430 | hypothetical protein | - |
| FR761_RS17725 (FR761_17725) | - | 3629938..3632043 (+) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16837.43 Da Isoelectric Point: 8.5355
>NTDB_id=378436 FR761_RS17700 WP_001214065.1 3627033..3627506(-) (fimU) [Acinetobacter baumannii strain E47]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=378436 FR761_RS17700 WP_001214065.1 3627033..3627506(-) (fimU) [Acinetobacter baumannii strain E47]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |