Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   FR758_RS07835 Genome accession   NZ_CP042540
Coordinates   1654674..1655300 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain C4     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1649674..1660300
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FR758_RS07815 (FR758_07815) - 1650073..1651833 (-) 1761 WP_039271166.1 Lon protease family protein -
  FR758_RS07820 (FR758_07820) matP 1652020..1652472 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  FR758_RS07825 (FR758_07825) ompA 1652538..1653590 (-) 1053 WP_108376575.1 porin OmpA -
  FR758_RS07830 (FR758_07830) sulA 1653947..1654456 (-) 510 WP_026094322.1 SOS-induced cell division inhibitor SulA -
  FR758_RS07835 (FR758_07835) sxy/tfoX 1654674..1655300 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  FR758_RS07840 (FR758_07840) yccS 1655257..1657419 (-) 2163 WP_015570895.1 YccS family putative transporter -
  FR758_RS07845 (FR758_07845) - 1657438..1657884 (-) 447 WP_003858149.1 YccF domain-containing protein -
  FR758_RS07850 (FR758_07850) helD 1658007..1660061 (+) 2055 WP_039271162.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=378333 FR758_RS07835 WP_017384804.1 1654674..1655300(+) (sxy/tfoX) [Enterobacter hormaechei strain C4]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=378333 FR758_RS07835 WP_017384804.1 1654674..1655300(+) (sxy/tfoX) [Enterobacter hormaechei strain C4]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGTCATCAGCGTAATCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment