Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   HB752_RS05145 Genome accession   NZ_CP050271
Coordinates   1023810..1025546 (-) Length   578 a.a.
NCBI ID   WP_019804744.1    Uniprot ID   -
Organism   Streptococcus mutans strain S1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1018810..1030546
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB752_RS05135 (HB752_05135) - 1020991..1021911 (-) 921 WP_002266551.1 AEC family transporter -
  HB752_RS05140 (HB752_05140) rcrQ 1022027..1023799 (-) 1773 WP_019804745.1 ABC transporter ATP-binding protein Regulator
  HB752_RS05145 (HB752_05145) rcrP 1023810..1025546 (-) 1737 WP_019804744.1 ABC transporter ATP-binding protein Regulator
  HB752_RS05150 (HB752_05150) - 1026002..1027870 (-) 1869 WP_019804743.1 ABC-F family ATP-binding cassette domain-containing protein -
  HB752_RS05155 (HB752_05155) - 1027873..1029078 (-) 1206 WP_002288861.1 CCA tRNA nucleotidyltransferase -
  HB752_RS05160 (HB752_05160) dapB 1029075..1029842 (-) 768 WP_002262893.1 4-hydroxy-tetrahydrodipicolinate reductase -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 65168.04 Da        Isoelectric Point: 9.4915

>NTDB_id=377767 HB752_RS05145 WP_019804744.1 1023810..1025546(-) (rcrP) [Streptococcus mutans strain S1]
MTYIWSYLKKYPKWLLLDILGALLFVVVNLGLPTALARMIDQGITPADKQALYFWAFIMFIIVLLGIVGRITLAYASGRL
TTTMIRDMRNDMYDKLQEYSHHEYKKIGISSLVTRMTSDAFVLMQFAEMSLRMGIVTPLMMVSSVIMVLVTSPSLAWIVV
FAIPFLILVIYYVAAKTRPLSEKQQNTLDKINQYVRENLTGLRVIRAFARENFQEERFDLKNRSYEKTSNRLFKLTGLTE
ALFVQIIIIMIVAIVWFSLDPLKQGTIKIGDLVAFIEYSFHALFSFLIFANIFTMYPRMAVSSKRIQEVMAMPISIDPNI
NGIKETKTKGYLEFDNVTFAYPGETESPVLHDISFKARPGETIAFIGSTGSGKSSLVNLIPRFYDVTLGRILVDGVDVRD
YNLKALRQKIGFIPQKALLFTGTIGENLKYGKKDASLAELHSAADIAQAKEFIESRAEKFDSHLAEGGSNLSGGQKQRLS
IARAVVKKPDIYIFDDSFSALDYKTDSLLRQRLKEVTGNSTVLIVAQRVGTIMNADQIIVLDEGEIVGRGSHDELMKSNA
IYREIANSQLNQQSLTQE

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=377767 HB752_RS05145 WP_019804744.1 1023810..1025546(-) (rcrP) [Streptococcus mutans strain S1]
ATGACATATATTTGGTCTTATTTAAAAAAATATCCCAAATGGTTACTATTGGACATTCTTGGTGCCCTTTTATTTGTTGT
TGTCAATTTGGGCTTACCGACAGCTCTGGCACGAATGATTGATCAAGGGATCACACCGGCTGATAAACAAGCTCTTTATT
TTTGGGCTTTTATTATGTTTATCATTGTTCTTTTAGGAATAGTCGGGCGTATTACCCTAGCCTATGCTTCTGGCAGATTA
ACCACGACCATGATTCGCGATATGCGCAATGATATGTATGATAAATTGCAAGAGTACTCCCATCACGAATATAAGAAAAT
TGGTATCTCTTCCTTGGTTACACGTATGACCAGTGACGCCTTTGTACTTATGCAATTTGCAGAAATGTCCTTGCGGATGG
GAATTGTTACCCCCTTGATGATGGTCTCAAGTGTTATTATGGTTTTGGTGACTAGCCCATCTTTGGCTTGGATTGTAGTA
TTTGCTATTCCTTTTTTGATACTGGTGATTTATTATGTTGCTGCAAAAACACGCCCTTTGTCTGAAAAGCAGCAAAATAC
GCTTGATAAGATTAACCAGTACGTTCGTGAAAACTTAACGGGTCTACGTGTTATTCGTGCCTTTGCGCGTGAAAATTTTC
AAGAAGAACGCTTTGACTTAAAAAACAGAAGTTATGAAAAGACTTCTAACAGACTATTTAAATTAACCGGACTCACAGAA
GCCCTGTTTGTTCAGATTATTATTATCATGATAGTAGCTATTGTCTGGTTTTCATTAGATCCGCTTAAGCAAGGGACTAT
TAAGATTGGTGATCTGGTTGCTTTTATTGAGTATAGTTTTCATGCTCTCTTTTCTTTTTTAATATTTGCTAATATTTTCA
CTATGTATCCGCGAATGGCTGTATCTAGTAAACGTATCCAAGAGGTAATGGCTATGCCTATTTCCATTGATCCTAATATA
AATGGCATTAAGGAGACTAAAACCAAAGGCTATTTGGAATTTGACAATGTGACCTTTGCCTATCCCGGTGAGACCGAAAG
TCCTGTCTTGCATGATATTTCTTTTAAAGCTAGACCGGGAGAAACGATTGCTTTTATTGGCAGTACAGGTTCAGGAAAGT
CATCGCTTGTTAATTTGATTCCCCGTTTTTATGATGTAACTTTGGGTCGGATTCTGGTTGATGGTGTGGATGTCCGTGAC
TATAATCTTAAGGCTCTGCGTCAGAAAATTGGTTTTATTCCGCAAAAAGCGCTGCTATTTACTGGAACCATTGGAGAAAA
TCTTAAGTATGGGAAAAAGGATGCTAGTCTGGCTGAATTGCATTCAGCTGCTGATATTGCACAAGCTAAAGAATTCATCG
AAAGTCGAGCTGAGAAATTTGATAGCCACTTAGCAGAAGGCGGCAGCAATCTTTCAGGGGGACAGAAGCAGCGCTTGTCT
ATCGCGCGTGCAGTTGTTAAGAAACCAGATATCTATATTTTTGATGATTCCTTTTCAGCCTTAGATTATAAGACGGATAG
TCTCCTGCGTCAGCGTTTGAAAGAAGTGACAGGCAATTCAACAGTGCTCATTGTAGCCCAACGTGTCGGAACTATTATGA
ATGCTGACCAGATTATTGTACTGGATGAAGGAGAAATTGTTGGTCGCGGCAGCCATGATGAACTCATGAAGTCCAATGCC
ATTTATCGTGAAATTGCCAACTCACAGCTCAATCAGCAAAGTTTAACGCAAGAGTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(17-280)

ABC transporter (ABC_tran)

(350-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.201

95.329

0.374

Multiple sequence alignment