Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   HB752_RS05140 Genome accession   NZ_CP050271
Coordinates   1022027..1023799 (-) Length   590 a.a.
NCBI ID   WP_019804745.1    Uniprot ID   -
Organism   Streptococcus mutans strain S1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1017027..1028799
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB752_RS05135 (HB752_05135) - 1020991..1021911 (-) 921 WP_002266551.1 AEC family transporter -
  HB752_RS05140 (HB752_05140) rcrQ 1022027..1023799 (-) 1773 WP_019804745.1 ABC transporter ATP-binding protein Regulator
  HB752_RS05145 (HB752_05145) rcrP 1023810..1025546 (-) 1737 WP_019804744.1 ABC transporter ATP-binding protein Regulator
  HB752_RS05150 (HB752_05150) - 1026002..1027870 (-) 1869 WP_019804743.1 ABC-F family ATP-binding cassette domain-containing protein -

Sequence


Protein


Download         Length: 590 a.a.        Molecular weight: 66769.57 Da        Isoelectric Point: 7.2589

>NTDB_id=377766 HB752_RS05140 WP_019804745.1 1022027..1023799(-) (rcrQ) [Streptococcus mutans strain S1]
MKKKTVFLRLWYYLKTYKGSLFLAIFLKILSSVMNVLEPFILGLVMTELTANLIDMARGVQGAHLNISYITMILFLYFLR
GLLYSIGSYGSNYFMTNAVQKSIYDLRHDLSKKINKIPVSYFDKHQFGDMLGRFTNDVETVSNALQQSFLQIINAFLTII
LVVVMVLCLNLTLAAIILVCIPLTYFSSRFILRKSQPYFKKQANALGDMNSFVQENLTGFNVIKLYGREEISAETFRTIT
ENLRDVGFKASFISGIMMPVLNAISDLAYLIVALVGGLQVLAGRLTIGNMQAFVQYIWQINQPIQTITQLSSVLQSAKSS
LERIFEVLDETDEVNQVKEKLEHDLTGQVTFHNVAFQYTEDKPLIRHFDLDVKPGQMIAVVGPTGAGKTTLINLLMRFYD
VTQGAITVDNHDIRNLSRQEYRKQFGMVLQDAWLYEGTIKDNLRFGNLQASDEEIVEAAKAANVDHFIRTLPDGYNMEVN
QESNNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMSKLMEGRTSFVIAHRLSTIQEADKILVLKEGQ
IIEQGNHQSLLADKGFYYDLYMSQFSAKTN

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=377766 HB752_RS05140 WP_019804745.1 1022027..1023799(-) (rcrQ) [Streptococcus mutans strain S1]
ATGAAAAAGAAAACTGTTTTTTTACGCTTATGGTATTATTTGAAGACCTATAAAGGTTCACTTTTTTTGGCCATTTTCTT
AAAAATACTTAGCAGTGTCATGAATGTCCTTGAACCTTTTATTTTAGGACTGGTAATGACAGAATTAACGGCTAACCTAA
TTGATATGGCTCGCGGAGTTCAAGGCGCTCATCTTAATATCAGTTATATCACCATGATTTTGTTTCTTTATTTTTTACGC
GGATTGCTGTATAGTATTGGCTCTTACGGTTCTAATTACTTTATGACTAATGCAGTGCAAAAAAGTATTTACGATTTGCG
TCATGATTTAAGTAAAAAGATTAATAAGATTCCCGTTTCCTATTTTGATAAACATCAATTTGGTGATATGTTAGGACGTT
TTACTAATGACGTTGAAACGGTCTCTAACGCTTTGCAGCAGAGCTTTCTGCAAATTATTAATGCCTTTTTAACGATTATC
CTTGTTGTGGTTATGGTACTCTGCCTTAATTTGACCTTGGCGGCGATTATTCTTGTTTGTATTCCGCTGACTTATTTCAG
TTCTCGTTTTATTTTAAGGAAATCACAGCCTTATTTTAAAAAACAGGCTAATGCTTTAGGGGATATGAACAGTTTCGTTC
AGGAAAACTTAACGGGCTTTAATGTCATAAAACTCTATGGACGTGAAGAAATATCTGCTGAAACCTTTCGAACTATCACA
GAAAATTTACGAGATGTCGGCTTTAAAGCCAGTTTTATTTCTGGAATAATGATGCCAGTTCTTAATGCTATCTCAGACTT
AGCTTATTTGATTGTTGCATTAGTTGGCGGCCTGCAGGTCTTAGCAGGGAGACTGACTATTGGTAATATGCAGGCCTTTG
TTCAATACATTTGGCAAATCAATCAGCCTATTCAGACCATCACACAATTATCAAGTGTTCTTCAAAGTGCTAAATCTTCT
CTAGAACGTATTTTTGAGGTTTTGGATGAAACAGACGAAGTCAATCAAGTCAAGGAAAAGCTGGAACATGATTTGACAGG
GCAAGTGACCTTTCATAATGTCGCCTTTCAATATACTGAGGATAAGCCTTTAATTCGACATTTTGATTTAGATGTTAAAC
CGGGTCAGATGATTGCTGTTGTTGGTCCGACCGGGGCGGGTAAGACAACTCTTATCAATCTTTTGATGCGTTTTTATGAT
GTTACCCAAGGAGCGATTACAGTAGATAATCATGATATCCGTAACCTTTCCCGTCAGGAATATCGGAAACAATTTGGGAT
GGTTCTTCAAGATGCTTGGTTATATGAAGGGACGATCAAAGACAATTTGCGCTTTGGAAATTTGCAGGCAAGTGATGAGG
AAATTGTCGAAGCGGCCAAGGCAGCTAATGTCGATCATTTTATCCGAACCCTTCCAGATGGTTATAATATGGAAGTCAAT
CAAGAATCTAATAATATTTCTTTGGGGCAAAAGCAATTATTAACCATCGCACGAGCGCTGCTGGCTGATCCCAAAATTCT
GATTCTGGATGAAGCGACTTCTTCAGTTGATACTCGTTTGGAACTTCTCATTCAAAAAGCTATGAGTAAGCTTATGGAAG
GCCGCACTAGCTTTGTTATTGCTCATCGTCTTTCAACTATCCAAGAAGCGGATAAGATTCTTGTCCTTAAGGAAGGTCAA
ATTATTGAACAGGGGAACCACCAAAGTCTCTTAGCTGACAAGGGCTTCTATTATGATTTGTATATGAGTCAGTTTAGCGC
TAAAACCAATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

44.857

100

0.451


Multiple sequence alignment