Detailed information NTG0037775

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NWAT_RS08505
• Genome accession: NC_014315
• Coordinates: 1899480..1900538 (+)
• Length: 352 a.a.
• NCBI ID: WP_013220695.1
• Uniprot ID: D8K6S6
• Organism: Nitrosococcus watsonii C-113
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1894480..1905538

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NWAT_RS08475 (Nwat_1727)	cobC	1894676..1895281 (-)	606	WP_013220689.1	alpha-ribazole phosphatase	-
NWAT_RS08480 (Nwat_1728)	-	1895318..1895572 (-)	255	WP_013220690.1	YfhL family 4Fe-4S dicluster ferredoxin	-
NWAT_RS08485 (Nwat_1729)	coaD	1895610..1896092 (-)	483	WP_013220691.1	pantetheine-phosphate adenylyltransferase	-
NWAT_RS08490 (Nwat_1730)	rsmD	1896113..1896718 (-)	606	WP_013220692.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NWAT_RS08495 (Nwat_1731)	-	1896702..1898006 (-)	1305	WP_013220693.1	pitrilysin family protein	-
NWAT_RS08500 (Nwat_1732)	-	1897996..1899375 (-)	1380	WP_013220694.1	pitrilysin family protein	-
NWAT_RS08505 (Nwat_1733)	pilA	1899480..1900538 (+)	1059	WP_013220695.1	signal recognition particle-docking protein FtsY	Machinery gene
NWAT_RS08510 (Nwat_1734)	rpoH	1900695..1901558 (+)	864	WP_013220696.1	RNA polymerase sigma factor RpoH	-
NWAT_RS08515 (Nwat_1735)	-	1901634..1902353 (-)	720	WP_232420076.1	serine protease	-
NWAT_RS08520 (Nwat_1736)	-	1902419..1903693 (-)	1275	WP_013220698.1	VanZ family protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38189.16 Da
• Isoelectric Point: 7.4270

>NTDB_id=37775 NWAT_RS08505 WP_013220695.1 1899480..1900538(+) (pilA) [Nitrosococcus watsonii C-113]
MVSFFKRKRKSPEQNSEATPPPATTQAREKQSLFKRLRERLGRTRNNLTGGIADLMLGKKSIDDELLEEIEAQLLIADVG
VEATQAIIKDLTVRTSRKQLQDAEALMAALRENMQALLTPCNQPLIIPAAIQPFVILMVGVNGVGKTTTIGKLAKKFQAE
GRSVMLAAGDTFRAAAVEQLQVWGERNQVPVMAQHGGADSASVIFDAVQSAQARGIDVLIADTAGRLHTQINLMEELKKI
KRVMGKVNPHAPHEIMLTVDAGTGQNALNQAKQFHEAVGLTGIILTKLDGTAKGGVIFAIAKKMGIPIRFIGVGEGIDDL
RPFNAEEFVDALLTPLPPKEGEEFENLPEQPN

Nucleotide

• Length: 1059 bp

>NTDB_id=37775 NWAT_RS08505 WP_013220695.1 1899480..1900538(+) (pilA) [Nitrosococcus watsonii C-113]
ATGGTAAGTTTCTTTAAGCGTAAGCGAAAGAGCCCAGAACAAAATTCAGAAGCAACTCCTCCTCCGGCAACCACCCAAGC
AAGGGAAAAACAATCTTTATTCAAACGCCTGCGTGAGCGCCTCGGCCGTACCCGCAATAATCTGACGGGCGGTATTGCTG
ATCTGATGCTAGGCAAAAAATCCATTGATGATGAATTACTAGAAGAGATTGAAGCTCAATTACTTATTGCGGATGTGGGA
GTAGAAGCCACCCAGGCTATTATTAAAGATCTCACCGTTCGAACCTCCCGCAAGCAACTCCAAGATGCGGAAGCCTTGAT
GGCAGCCCTGCGAGAGAATATGCAAGCTTTACTGACGCCTTGCAACCAACCGTTAATAATTCCAGCAGCCATTCAACCCT
TTGTCATTCTCATGGTAGGCGTCAATGGAGTCGGTAAAACTACCACTATTGGCAAGCTAGCGAAAAAATTCCAGGCTGAG
GGTCGCTCGGTAATGCTCGCTGCTGGCGATACCTTTCGTGCTGCAGCAGTGGAGCAATTGCAAGTATGGGGTGAACGCAA
TCAAGTTCCGGTCATGGCCCAGCACGGCGGAGCCGATTCCGCCTCAGTAATCTTTGATGCTGTGCAATCAGCCCAGGCCC
GGGGAATTGATGTGCTCATTGCGGACACCGCAGGTCGGCTCCATACCCAGATCAATCTTATGGAGGAACTCAAGAAGATA
AAACGAGTCATGGGTAAAGTTAATCCCCACGCTCCCCATGAAATAATGCTGACCGTGGATGCTGGAACAGGCCAAAATGC
ACTGAATCAGGCTAAACAATTCCATGAAGCCGTTGGCCTTACTGGGATTATCCTGACCAAGTTAGACGGTACTGCCAAAG
GAGGGGTGATCTTTGCTATTGCTAAAAAAATGGGGATCCCCATCCGTTTCATCGGTGTCGGCGAGGGCATTGATGACCTA
CGCCCCTTTAACGCCGAAGAATTTGTGGATGCCTTACTTACCCCGCTGCCTCCGAAAGAAGGCGAAGAATTTGAGAATTT
ACCAGAGCAACCAAATTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (133-333)

• SRP54-type protein, helical bundle domain (SRP54_N) (48-114)

3D structure

• AlphaFold DB: D8K6S6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	55.627	88.352	0.491