Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   HB753_RS04700 Genome accession   NZ_CP050270
Coordinates   926071..926742 (-) Length   223 a.a.
NCBI ID   WP_002263237.1    Uniprot ID   Q8DUD1
Organism   Streptococcus mutans strain S4     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 921071..931742
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB753_RS04680 (HB753_04680) - 922156..922845 (+) 690 WP_002269136.1 GntR family transcriptional regulator -
  HB753_RS04685 (HB753_04685) citG 922852..923742 (+) 891 WP_002265082.1 triphosphoribosyl-dephospho-CoA synthase CitG -
  HB753_RS04690 (HB753_04690) citC 923918..924967 (+) 1050 WP_002278015.1 [citrate (pro-3S)-lyase] ligase -
  HB753_RS04695 (HB753_04695) - 925121..926074 (-) 954 WP_002263236.1 sensor histidine kinase -
  HB753_RS04700 (HB753_04700) braR 926071..926742 (-) 672 WP_002263237.1 DNA-binding response regulator Regulator
  HB753_RS04705 (HB753_04705) - 926784..928787 (-) 2004 WP_002269133.1 ABC transporter permease -
  HB753_RS04710 (HB753_04710) - 928789..929541 (-) 753 WP_002265085.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 223 a.a.        Molecular weight: 25802.90 Da        Isoelectric Point: 5.1691

>NTDB_id=377643 HB753_RS04700 WP_002263237.1 926071..926742(-) (braR) [Streptococcus mutans strain S4]
MLKQEKIYLVEDDTTIVNLLKNHLGQHYQVKSVDNFRAILQEVKEFKPDLILMDITLPYFNGFYWTTEIRKSMTMPIIFI
SSADEEMNAVMAMNMGGDDFLSKPFSLPILDAKIAAFLRRANEFTKQGHQIEEFELTLDGVFSNLERQETIQLTPTETKI
LSLLIDYKGEVVTKEALLNRLWEGEEFIDQNTLSVNMTRLRKKVLSVSFDKIHTVRGVGYLIK

Nucleotide


Download         Length: 672 bp        

>NTDB_id=377643 HB753_RS04700 WP_002263237.1 926071..926742(-) (braR) [Streptococcus mutans strain S4]
ATGCTAAAGCAAGAAAAAATTTACTTGGTTGAAGATGATACAACCATTGTCAATCTTTTAAAGAATCATTTGGGACAACA
CTATCAAGTTAAAAGCGTTGATAACTTTAGGGCTATCTTGCAAGAAGTTAAAGAATTTAAACCCGATTTAATTCTGATGG
ATATTACTTTGCCCTATTTCAATGGCTTTTATTGGACTACTGAAATCAGAAAGAGCATGACCATGCCCATTATTTTTATT
TCCAGTGCTGATGAAGAAATGAATGCAGTAATGGCTATGAATATGGGAGGTGATGATTTTTTGAGCAAGCCTTTCTCGCT
GCCTATTTTGGATGCCAAAATCGCTGCTTTCTTGCGCCGTGCTAACGAGTTCACTAAGCAAGGCCATCAAATTGAAGAGT
TTGAATTAACGTTAGATGGTGTATTCTCAAATTTAGAAAGACAAGAGACTATCCAATTGACTCCAACAGAAACGAAAATT
CTTTCCTTACTTATTGATTATAAAGGAGAGGTTGTCACTAAGGAAGCTCTTCTCAATCGACTATGGGAGGGAGAGGAATT
TATTGATCAAAACACGCTTAGTGTCAATATGACACGTCTTCGTAAAAAGGTTCTATCAGTAAGTTTTGATAAGATTCATA
CAGTAAGAGGAGTAGGGTATTTAATTAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(7-114)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DUD1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

43.498

100

0.435