Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | FR838_RS00445 | Genome accession | NZ_CP042364 |
| Coordinates | 86584..86964 (+) | Length | 126 a.a. |
| NCBI ID | WP_002121425.1 | Uniprot ID | A0A009HD22 |
| Organism | Acinetobacter pittii strain C54 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 81584..91964
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FR838_RS00415 (FR838_00415) | kdsB | 82490..83251 (+) | 762 | WP_002121419.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| FR838_RS00420 (FR838_00420) | holB | 83265..84245 (+) | 981 | WP_002121362.1 | DNA polymerase III subunit delta' | - |
| FR838_RS00425 (FR838_00425) | pilZ | 84256..84597 (+) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| FR838_RS00430 (FR838_00430) | ycfH | 84615..85388 (+) | 774 | WP_002121462.1 | TatD family hydrolase | - |
| FR838_RS00435 (FR838_00435) | - | 85425..86033 (+) | 609 | WP_002121414.1 | TetR/AcrR family transcriptional regulator | - |
| FR838_RS00440 (FR838_00440) | - | 86040..86594 (+) | 555 | WP_002121405.1 | type II secretion system protein | - |
| FR838_RS00445 (FR838_00445) | xcpV | 86584..86964 (+) | 381 | WP_002121425.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| FR838_RS00450 (FR838_00450) | xcpW | 86964..87779 (+) | 816 | WP_002121460.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| FR838_RS00455 (FR838_00455) | gspK | 87780..88739 (+) | 960 | WP_002121457.1 | type II secretion system minor pseudopilin GspK | - |
| FR838_RS00460 (FR838_00460) | - | 88967..89563 (+) | 597 | WP_002121363.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| FR838_RS00465 (FR838_00465) | ung | 89617..90330 (+) | 714 | WP_002121342.1 | uracil-DNA glycosylase | - |
| FR838_RS00470 (FR838_00470) | hibch | 90327..91451 (+) | 1125 | WP_016803061.1 | enoyl-CoA hydratase/isomerase family protein | - |
| FR838_RS00475 (FR838_00475) | tadA | 91457..91960 (+) | 504 | WP_002121378.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13976.17 Da Isoelectric Point: 9.4463
>NTDB_id=377420 FR838_RS00445 WP_002121425.1 86584..86964(+) (xcpV) [Acinetobacter pittii strain C54]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=377420 FR838_RS00445 WP_002121425.1 86584..86964(+) (xcpV) [Acinetobacter pittii strain C54]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATTTACAAATTAGCTTATATGATTCAGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATTTACAAATTAGCTTATATGATTCAGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
93.651 |
100 |
0.937 |