Detailed information
Bioinformatically predicted
Overview
| Name | tsaP | Type | Machinery gene |
| Locus tag | HBA22_RS00100 | Genome accession | NZ_CP050149 |
| Coordinates | 21631..22656 (+) | Length | 341 a.a. |
| NCBI ID | WP_003097294.1 | Uniprot ID | A0A0H2ZJL6 |
| Organism | Pseudomonas aeruginosa strain CHA | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 16631..27656
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HBA22_RS00075 (HBA22_00075) | - | 16819..17136 (-) | 318 | WP_003120685.1 | tetratricopeptide repeat protein | - |
| HBA22_RS00080 (HBA22_00080) | trkA | 17285..18658 (-) | 1374 | WP_003107053.1 | Trk system potassium transporter TrkA | - |
| HBA22_RS00085 (HBA22_00085) | rsmB | 18686..19990 (-) | 1305 | WP_003122291.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| HBA22_RS00090 (HBA22_00090) | fmt | 19987..20931 (-) | 945 | WP_003122290.1 | methionyl-tRNA formyltransferase | - |
| HBA22_RS00095 (HBA22_00095) | def | 20986..21492 (-) | 507 | WP_003107059.1 | peptide deformylase | - |
| HBA22_RS00100 (HBA22_00100) | tsaP | 21631..22656 (+) | 1026 | WP_003097294.1 | LysM peptidoglycan-binding domain-containing protein | Machinery gene |
| HBA22_RS00105 (HBA22_00105) | dprA | 22791..23879 (+) | 1089 | WP_003122289.1 | DNA-processing protein DprA | Machinery gene |
| HBA22_RS00110 (HBA22_00110) | - | 23920..24477 (+) | 558 | WP_003097300.1 | Sua5/YciO/YrdC/YwlC family protein | - |
| HBA22_RS00115 (HBA22_00115) | - | 24487..25464 (-) | 978 | WP_003111202.1 | NADPH:quinone reductase | - |
| HBA22_RS00120 (HBA22_00120) | hemF | 25655..26572 (+) | 918 | WP_003097311.1 | oxygen-dependent coproporphyrinogen oxidase | - |
| HBA22_RS00125 (HBA22_00125) | aroE | 26630..27454 (+) | 825 | WP_003111201.1 | shikimate dehydrogenase | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 37586.01 Da Isoelectric Point: 9.3358
>NTDB_id=377286 HBA22_RS00100 WP_003097294.1 21631..22656(+) (tsaP) [Pseudomonas aeruginosa strain CHA]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP
Nucleotide
Download Length: 1026 bp
>NTDB_id=377286 HBA22_RS00100 WP_003097294.1 21631..22656(+) (tsaP) [Pseudomonas aeruginosa strain CHA]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTT
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTT
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| tsaP | Acinetobacter baumannii D1279779 |
36.512 |
100 |
0.393 |