Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   FSN22_RS10755 Genome accession   NZ_CP042348
Coordinates   2109049..2109765 (+) Length   238 a.a.
NCBI ID   WP_147050605.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BSN9R     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2104049..2114765
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSN22_RS10725 (FSN22_10725) - 2104268..2104894 (+) 627 WP_000522384.1 nitroreductase family protein -
  FSN22_RS10730 (FSN22_10730) - 2105255..2106040 (+) 786 WP_000867960.1 carbon-nitrogen family hydrolase -
  FSN22_RS14900 hld 2106637..2106717 (-) 81 WP_000046022.1 delta-hemolysin -
  FSN22_RS10740 (FSN22_10740) agrB 2107007..2107576 (+) 570 WP_001105707.1 accessory gene regulator AgrB -
  FSN22_RS10745 (FSN22_10745) agrD 2107573..2107713 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  FSN22_RS10750 (FSN22_10750) agrC 2107738..2109030 (+) 1293 WP_001549202.1 quorum-sensing sensor histidine kinase AgrC -
  FSN22_RS10755 (FSN22_10755) agrA 2109049..2109765 (+) 717 WP_147050605.1 quorum-sensing response regulator AgrA Regulator
  FSN22_RS10760 (FSN22_10760) - 2109837..2109944 (+) 108 WP_001790167.1 hypothetical protein -
  FSN22_RS10765 (FSN22_10765) - 2110132..2111091 (-) 960 WP_001253312.1 carbohydrate kinase -
  FSN22_RS10770 (FSN22_10770) - 2111088..2112572 (-) 1485 WP_000141414.1 sucrose-6-phosphate hydrolase -
  FSN22_RS10775 (FSN22_10775) - 2112721..2113671 (-) 951 WP_000790330.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27939.96 Da        Isoelectric Point: 6.2996

>NTDB_id=377282 FSN22_RS10755 WP_147050605.1 2109049..2109765(+) (agrA) [Staphylococcus aureus strain BSN9R]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFYSSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=377282 FSN22_RS10755 WP_147050605.1 2109049..2109765(+) (agrA) [Staphylococcus aureus strain BSN9R]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTTATTCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

99.58

100

0.996

Multiple sequence alignment