Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | HBA47_RS06730 | Genome accession | NZ_CP050136 |
| Coordinates | 1271199..1271858 (-) | Length | 219 a.a. |
| NCBI ID | WP_026036228.1 | Uniprot ID | B6SE77 |
| Organism | Kingella kingae strain ATCC 23332 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1266199..1276858
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HBA47_RS06705 (HBA47_06720) | aroB | 1266222..1267304 (-) | 1083 | WP_038303704.1 | 3-dehydroquinate synthase | - |
| HBA47_RS06710 (HBA47_06725) | - | 1267304..1267816 (-) | 513 | WP_003789800.1 | shikimate kinase | - |
| HBA47_RS06715 (HBA47_06730) | pilQ | 1267873..1269975 (-) | 2103 | WP_003785828.1 | type IV pilus secretin PilQ | Machinery gene |
| HBA47_RS06720 (HBA47_06735) | pilP | 1270009..1270539 (-) | 531 | WP_019389251.1 | pilus assembly protein PilP | Machinery gene |
| HBA47_RS06725 (HBA47_06740) | pilO | 1270573..1271196 (-) | 624 | WP_003785825.1 | type 4a pilus biogenesis protein PilO | - |
| HBA47_RS06730 (HBA47_06745) | pilN | 1271199..1271858 (-) | 660 | WP_026036228.1 | PilN domain-containing protein | Machinery gene |
| HBA47_RS06735 (HBA47_06750) | pilM | 1271860..1272963 (-) | 1104 | WP_003785822.1 | type IV pilus assembly protein PilM | - |
| HBA47_RS06740 (HBA47_06755) | - | 1273105..1275474 (+) | 2370 | WP_154700149.1 | penicillin-binding protein 1A | - |
| HBA47_RS06745 (HBA47_06760) | serB | 1275550..1276386 (-) | 837 | WP_060537050.1 | phosphoserine phosphatase SerB | - |
Sequence
Protein
Download Length: 219 a.a. Molecular weight: 23515.11 Da Isoelectric Point: 9.2613
>NTDB_id=377056 HBA47_RS06730 WP_026036228.1 1271199..1271858(-) (pilN) [Kingella kingae strain ATCC 23332]
MNLIKINLLPYREMEEQKKKKQFQTIMVIGAAAGLVAAGLIYSSLAGMILNQQGRNESLQAGIATLDKELEEIKTLNEQK
RNFLERRQRIAELDNKRFEGARIIDTLNQLVPDGAYLLSLKGDASKNLVSNKYAITGKAISDNKVAVLMTALPSTGIFEQ
PELVKIEKTDDGQQFILNALLLEQKVIVPDVVGGGASVSSGAAAASVTSTPATSASGGK
MNLIKINLLPYREMEEQKKKKQFQTIMVIGAAAGLVAAGLIYSSLAGMILNQQGRNESLQAGIATLDKELEEIKTLNEQK
RNFLERRQRIAELDNKRFEGARIIDTLNQLVPDGAYLLSLKGDASKNLVSNKYAITGKAISDNKVAVLMTALPSTGIFEQ
PELVKIEKTDDGQQFILNALLLEQKVIVPDVVGGGASVSSGAAAASVTSTPATSASGGK
Nucleotide
Download Length: 660 bp
>NTDB_id=377056 HBA47_RS06730 WP_026036228.1 1271199..1271858(-) (pilN) [Kingella kingae strain ATCC 23332]
ATGAATTTGATTAAGATTAACTTGCTTCCCTATCGTGAGATGGAAGAGCAAAAGAAAAAGAAACAATTTCAAACAATCAT
GGTAATTGGTGCAGCAGCAGGTTTGGTTGCTGCGGGTCTGATTTACTCATCATTGGCTGGTATGATACTGAATCAGCAGG
GGCGTAACGAAAGTTTGCAGGCTGGTATTGCCACGCTAGATAAAGAATTGGAAGAAATTAAAACGCTCAATGAGCAAAAA
CGTAATTTTTTGGAACGTCGTCAACGTATCGCAGAATTGGATAATAAGCGATTTGAGGGTGCGCGAATTATTGATACATT
AAATCAACTTGTTCCCGACGGTGCTTATTTGTTGTCTTTGAAAGGCGATGCTTCTAAGAATTTGGTAAGTAATAAGTATG
CTATTACTGGTAAAGCGATTAGCGATAACAAAGTTGCTGTTTTAATGACTGCTTTACCAAGTACGGGTATTTTTGAACAG
CCAGAATTGGTGAAAATTGAAAAAACCGATGATGGTCAACAATTTATCTTGAATGCATTATTATTGGAACAAAAAGTGAT
TGTTCCTGATGTGGTGGGTGGTGGTGCATCTGTTTCATCGGGTGCAGCAGCTGCGTCGGTAACATCAACACCTGCTACAA
GTGCATCGGGAGGTAAATAA
ATGAATTTGATTAAGATTAACTTGCTTCCCTATCGTGAGATGGAAGAGCAAAAGAAAAAGAAACAATTTCAAACAATCAT
GGTAATTGGTGCAGCAGCAGGTTTGGTTGCTGCGGGTCTGATTTACTCATCATTGGCTGGTATGATACTGAATCAGCAGG
GGCGTAACGAAAGTTTGCAGGCTGGTATTGCCACGCTAGATAAAGAATTGGAAGAAATTAAAACGCTCAATGAGCAAAAA
CGTAATTTTTTGGAACGTCGTCAACGTATCGCAGAATTGGATAATAAGCGATTTGAGGGTGCGCGAATTATTGATACATT
AAATCAACTTGTTCCCGACGGTGCTTATTTGTTGTCTTTGAAAGGCGATGCTTCTAAGAATTTGGTAAGTAATAAGTATG
CTATTACTGGTAAAGCGATTAGCGATAACAAAGTTGCTGTTTTAATGACTGCTTTACCAAGTACGGGTATTTTTGAACAG
CCAGAATTGGTGAAAATTGAAAAAACCGATGATGGTCAACAATTTATCTTGAATGCATTATTATTGGAACAAAAAGTGAT
TGTTCCTGATGTGGTGGGTGGTGGTGCATCTGTTTCATCGGGTGCAGCAGCTGCGTCGGTAACATCAACACCTGCTACAA
GTGCATCGGGAGGTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
45.556 |
82.192 |
0.374 |