Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV/pilI   Type   Regulator
Locus tag   HBA48_RS06245 Genome accession   NZ_CP050135
Coordinates   1192108..1192722 (-) Length   204 a.a.
NCBI ID   WP_003790053.1    Uniprot ID   -
Organism   Kingella kingae strain ATCC 23331     
Function   repress natural transformation; antagonize ComP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1187108..1197722
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBA48_RS06225 (HBA48_06255) - 1188101..1189765 (-) 1665 WP_164538183.1 AMP-binding protein -
  HBA48_RS06230 (HBA48_06260) - 1189889..1190374 (-) 486 WP_003790055.1 prepilin-type N-terminal cleavage/methylation domain-containing protein -
  HBA48_RS06235 (HBA48_06265) - 1190381..1190989 (-) 609 WP_003786044.1 PilX N-terminal domain-containing pilus assembly protein -
  HBA48_RS06240 (HBA48_06270) - 1191023..1192087 (-) 1065 WP_038310939.1 cleavage protein -
  HBA48_RS06245 (HBA48_06275) pilV/pilI 1192108..1192722 (-) 615 WP_003790053.1 type IV pilus modification protein PilV Regulator
  HBA48_RS06250 (HBA48_06280) - 1192749..1193468 (-) 720 WP_038310941.1 GspH/FimT family pseudopilin -
  HBA48_RS06255 (HBA48_06285) dnaB 1193502..1194911 (-) 1410 WP_003790051.1 replicative DNA helicase -
  HBA48_RS06260 (HBA48_06290) - 1195041..1195571 (-) 531 WP_003786039.1 inorganic diphosphatase -
  HBA48_RS06265 (HBA48_06295) - 1195884..1196813 (+) 930 WP_038310943.1 TonB family protein -
  HBA48_RS06270 (HBA48_06300) - 1196875..1197534 (+) 660 WP_032827637.1 MotA/TolQ/ExbB proton channel family protein -

Sequence

Protein


Download         Length: 204 a.a.        Molecular weight: 22274.47 Da        Isoelectric Point: 8.4163

>NTDB_id=376990 HBA48_RS06245 WP_003790053.1 1192108..1192722(-) (pilV/pilI) [Kingella kingae strain ATCC 23331]
MKNMTYFHTKYSMKGATLLEVMISVLLLTFGILALMAAQLRSVASISEAENRSIVSQAAEALAEGMQMNAVLTKNGTTYR
RRYSNYVPKSRPLYPGSAVTAPTSLNRTNITKVELAAQHLAEFEYVLSTQLPNVSVLAYAICLDKPDATPPVLGDGGALT
DNCAPNNNEHNTNMIKIAWRMGNANGTDKNQQSTTYTYMLEVGN

Nucleotide


Download         Length: 615 bp        

>NTDB_id=376990 HBA48_RS06245 WP_003790053.1 1192108..1192722(-) (pilV/pilI) [Kingella kingae strain ATCC 23331]
ATGAAAAATATGACTTATTTTCATACTAAATATTCAATGAAAGGTGCAACACTACTGGAAGTGATGATTTCCGTGTTGTT
GCTGACCTTTGGTATTTTGGCATTGATGGCGGCGCAGTTGCGTTCTGTTGCAAGCATTAGTGAAGCGGAAAATCGCAGTA
TTGTGTCGCAGGCTGCAGAAGCGTTAGCAGAAGGCATGCAAATGAATGCAGTTCTGACTAAAAATGGAACGACTTATCGT
CGTCGTTATTCTAATTATGTGCCAAAGAGTAGGCCATTGTATCCAGGCAGCGCAGTCACAGCTCCTACTTCTTTGAACAG
AACAAATATTACAAAAGTAGAGCTGGCAGCACAACATTTAGCTGAATTTGAATATGTTTTGAGTACTCAATTACCGAATG
TATCTGTGCTTGCATATGCGATTTGTTTAGATAAACCAGATGCAACCCCCCCTGTTTTGGGTGATGGCGGGGCATTGACC
GATAATTGTGCACCAAACAATAATGAGCATAACACCAATATGATTAAGATTGCATGGCGCATGGGTAATGCCAATGGAAC
GGACAAGAATCAACAATCTACTACTTATACCTATATGCTAGAAGTAGGCAACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV/pilI Neisseria gonorrhoeae MS11

34.722

100

0.368