Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   HBA50_RS07650 Genome accession   NZ_CP050133
Coordinates   1529756..1530238 (+) Length   160 a.a.
NCBI ID   WP_005590897.1    Uniprot ID   A0ABM5NLK3
Organism   Streptococcus cristatus ATCC 51100     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1524756..1535238
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBA50_RS07625 (HBA50_07625) - 1525105..1525881 (-) 777 WP_045498919.1 ABC transporter permease -
  HBA50_RS07630 (HBA50_07630) - 1525868..1526821 (-) 954 WP_045498916.1 ABC transporter ATP-binding protein -
  HBA50_RS07635 (HBA50_07635) - 1526821..1527417 (-) 597 WP_045498913.1 TetR/AcrR family transcriptional regulator -
  HBA50_RS07640 (HBA50_07640) - 1527657..1527758 (-) 102 Protein_1495 SAM-dependent methyltransferase -
  HBA50_RS07645 (HBA50_07645) - 1527865..1529478 (-) 1614 WP_045498910.1 ribonuclease Y -
  HBA50_RS07650 (HBA50_07650) luxS 1529756..1530238 (+) 483 WP_005590897.1 S-ribosylhomocysteine lyase Regulator
  HBA50_RS07655 (HBA50_07655) - 1530335..1531024 (-) 690 WP_045498907.1 response regulator transcription factor -
  HBA50_RS07660 (HBA50_07660) gndA 1531034..1532458 (-) 1425 WP_045498904.1 NADP-dependent phosphogluconate dehydrogenase -
  HBA50_RS07665 (HBA50_07665) - 1532621..1534084 (-) 1464 WP_045498900.1 flotillin family protein -
  HBA50_RS07670 (HBA50_07670) - 1534266..1534949 (-) 684 WP_045498897.1 Bax inhibitor-1/YccA family protein -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 17913.48 Da        Isoelectric Point: 4.8603

>NTDB_id=376935 HBA50_RS07650 WP_005590897.1 1529756..1530238(+) (luxS) [Streptococcus cristatus ATCC 51100]
MSKEVIVESFELDHTIVKAPYVRLIGEETGPKGDIISNFDIRLVQPNEDSIPTAGLHTIEHLLAMLIRKRIDGMIDCSPF
GCRTGFHMIMWGQHSATEIAQVIKSCLEEIAETTTWEDVPGTTIESCGNYKDHSLFSAKEWAKLILSQGISDNAFERHVL

Nucleotide


Download         Length: 483 bp        

>NTDB_id=376935 HBA50_RS07650 WP_005590897.1 1529756..1530238(+) (luxS) [Streptococcus cristatus ATCC 51100]
ATGTCTAAAGAAGTTATCGTTGAAAGTTTTGAGCTTGACCATACAATCGTAAAAGCACCCTATGTTCGCCTCATTGGCGA
GGAAACTGGTCCCAAGGGAGATATTATCTCTAACTTTGATATTCGTTTGGTGCAGCCAAATGAAGACTCTATTCCGACGG
CTGGCCTGCATACCATCGAGCATTTGCTGGCTATGCTTATTCGCAAGCGAATTGACGGTATGATTGACTGCTCACCTTTT
GGTTGCCGCACAGGCTTCCATATGATTATGTGGGGACAGCACTCAGCAACCGAAATTGCTCAAGTCATCAAATCTTGCTT
AGAAGAAATCGCTGAAACGACTACTTGGGAAGATGTCCCTGGTACTACTATCGAATCCTGTGGCAATTACAAGGATCACA
GCCTTTTTTCTGCCAAAGAATGGGCGAAACTCATTCTCAGCCAAGGAATCTCTGACAATGCTTTCGAGCGCCATGTCCTC
TAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(7-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

38.158

95

0.363