Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/blpH   Type   Regulator
Locus tag   HBA50_RS06040 Genome accession   NZ_CP050133
Coordinates   1207210..1208547 (-) Length   445 a.a.
NCBI ID   WP_045499625.1    Uniprot ID   -
Organism   Streptococcus cristatus ATCC 51100     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1202210..1213547
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBA50_RS06015 (HBA50_06015) - 1202928..1203098 (+) 171 WP_005590510.1 DUF3042 family protein -
  HBA50_RS06020 (HBA50_06020) - 1203343..1203741 (-) 399 WP_045499637.1 hypothetical protein -
  HBA50_RS06025 (HBA50_06025) - 1204092..1205252 (-) 1161 WP_045499634.1 ABC transporter permease subunit -
  HBA50_RS06030 (HBA50_06030) - 1205249..1206112 (-) 864 WP_045499631.1 ABC transporter ATP-binding protein -
  HBA50_RS06040 (HBA50_06040) comD/blpH 1207210..1208547 (-) 1338 WP_045499625.1 sensor histidine kinase Regulator
  HBA50_RS06045 (HBA50_06045) comE/blpR 1208580..1209311 (-) 732 WP_045499622.1 response regulator transcription factor Regulator
  HBA50_RS06050 (HBA50_06050) - 1209313..1209654 (-) 342 WP_045499619.1 LytTR family DNA-binding domain-containing protein -
  HBA50_RS06055 (HBA50_06055) - 1209838..1210410 (-) 573 WP_045499617.1 TetR/AcrR family transcriptional regulator -
  HBA50_RS06060 (HBA50_06060) - 1210537..1211379 (+) 843 WP_045499615.1 DegV family protein -
  HBA50_RS06065 (HBA50_06065) - 1211470..1212246 (+) 777 WP_045499613.1 XRE family transcriptional regulator -
  HBA50_RS06070 (HBA50_06070) - 1212264..1212698 (-) 435 WP_243746220.1 hypothetical protein -
  HBA50_RS06075 (HBA50_06075) - 1212813..1213295 (-) 483 WP_045499609.1 hypothetical protein -

Sequence

Protein


Download         Length: 445 a.a.        Molecular weight: 51570.13 Da        Isoelectric Point: 6.7848

>NTDB_id=376914 HBA50_RS06040 WP_045499625.1 1207210..1208547(-) (comD/blpH) [Streptococcus cristatus ATCC 51100]
MVIGLEIVLDLIQILILFVMYSRISGNHLSRYQYILAIIVYYVSGFIIVFFFYSSILSLVSYLFMPLFFLIFSLVISKNV
SKYLSIFYGLFPIVLWNLLHRSITFFILPGLGFSNIQQISHNKTLLTISALTASILSFVIPNVLQYNFEILNKQQNPRED
RKIIIFLNISMLIYYLLVQIFSYLEVMYRIDALLYRELVVVIYIIIFLISLNILDRNLRERIQQQLSEQRELQLRNMSDY
SQHIEELYNELRSFRHDYINILRSLKLGIDTHDLPAIEQIYNQVLKDSGQALNQSKYDLGRLSNIHNDALKSVLSAKFLE
AQSKGIEIGLEVPQEIKPQGMELLDFITIVSILADNAIEAAVETSHPVVSFAFLEQEGRQIFIVENTIKEFSIHSDNIFK
KGFSTKGENRGLGLSNVQNIISHYPNVSLRTTSHDHSFRQELEIK

Nucleotide


Download         Length: 1338 bp        

>NTDB_id=376914 HBA50_RS06040 WP_045499625.1 1207210..1208547(-) (comD/blpH) [Streptococcus cristatus ATCC 51100]
ATGGTTATAGGATTAGAAATAGTTTTAGATCTTATTCAAATTTTAATATTATTTGTTATGTATTCACGTATTAGTGGTAA
TCATTTGAGCCGATATCAATATATTCTGGCGATTATAGTTTATTATGTTTCTGGCTTTATAATAGTATTTTTCTTTTATA
GCTCTATTCTTTCTTTAGTGTCTTATTTATTTATGCCTCTTTTCTTTTTGATTTTTAGCTTAGTAATAAGTAAAAATGTA
TCAAAATATTTATCGATTTTTTATGGTCTTTTCCCAATTGTCCTTTGGAATCTACTGCATCGCTCTATAACTTTTTTTAT
CCTACCTGGTTTAGGTTTTTCGAATATTCAGCAAATTAGCCATAATAAAACTCTATTAACTATCTCAGCACTGACTGCAA
GTATTCTCTCATTTGTAATTCCTAATGTGCTCCAATATAATTTTGAAATATTGAATAAACAGCAGAATCCCAGAGAAGAT
AGAAAAATAATAATCTTTTTGAATATTTCCATGTTAATTTATTATTTACTAGTTCAAATTTTTTCTTATTTGGAAGTGAT
GTATAGAATAGATGCTTTATTATATAGAGAGTTGGTCGTAGTTATTTACATCATTATTTTCCTTATCTCACTTAATATCC
TAGACCGTAATTTGCGAGAGCGAATTCAACAGCAGTTAAGTGAACAAAGAGAGTTACAGTTAAGAAATATGTCCGATTAC
AGTCAGCATATTGAAGAACTTTATAATGAGTTGCGAAGTTTCCGGCATGATTACATCAATATTTTAAGGAGTCTGAAGTT
AGGAATTGATACGCATGATTTACCAGCCATTGAGCAGATTTATAACCAAGTCCTTAAAGACTCGGGTCAAGCACTCAACC
AATCTAAATATGATTTAGGCCGTCTGTCCAATATTCACAATGATGCTCTCAAGAGCGTATTGTCAGCAAAATTTCTAGAA
GCTCAGAGCAAGGGAATAGAAATTGGCTTGGAAGTTCCTCAAGAAATCAAACCTCAAGGAATGGAGTTGCTTGATTTTAT
CACGATTGTTTCCATACTGGCTGATAATGCTATAGAAGCAGCAGTGGAGACTAGTCATCCAGTAGTTTCTTTTGCCTTTT
TAGAGCAGGAAGGTAGACAGATTTTTATTGTTGAGAATACAATAAAAGAGTTTTCTATCCATTCCGATAATATTTTTAAA
AAGGGTTTTAGCACTAAAGGAGAAAATAGAGGGCTTGGTCTCTCCAATGTTCAAAATATTATCAGCCACTATCCCAATGT
TTCTCTGCGTACCACTAGTCATGATCACTCTTTTAGACAAGAGTTGGAGATAAAATGA

Domains

Predicted by InterProScan.

GHKL domain (HATPase_c_5)

(341-444)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

43.717

85.843

0.375