Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FRC90_RS02750 Genome accession   NZ_CP042303
Coordinates   587764..588174 (+) Length   136 a.a.
NCBI ID   WP_074686761.1    Uniprot ID   -
Organism   Paracidovorax citrulli strain NWB SC107     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 582764..593174
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FRC90_RS02730 (FRC90_02715) - 584016..585038 (-) 1023 WP_233427204.1 pectate lyase -
  FRC90_RS02735 (FRC90_02720) hemL 585198..586511 (-) 1314 WP_046060420.1 glutamate-1-semialdehyde 2,1-aminomutase -
  FRC90_RS02740 (FRC90_02725) - 586495..587451 (-) 957 WP_011794055.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  FRC90_RS02745 (FRC90_02730) - 587546..587719 (+) 174 WP_011794056.1 rubredoxin -
  FRC90_RS02750 (FRC90_02735) pilG 587764..588174 (+) 411 WP_074686761.1 response regulator Regulator
  FRC90_RS02755 (FRC90_02740) - 588174..588539 (+) 366 WP_011794058.1 response regulator -
  FRC90_RS02760 (FRC90_02745) - 588556..589083 (+) 528 WP_011794059.1 chemotaxis protein CheW -
  FRC90_RS02765 (FRC90_02750) - 589114..591351 (+) 2238 WP_011794060.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15095.42 Da        Isoelectric Point: 8.2591

>NTDB_id=376784 FRC90_RS02750 WP_074686761.1 587764..588174(+) (pilG) [Paracidovorax citrulli strain NWB SC107]
MTKLTQTSGATFKVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYQPQLIFCDILMPKLDGYQTCAIIKRN
ARFADTPVVMLSSRDGVFDKARGRMVGCQEYLTKPFTKDQLLKAVQQFGNAQQGAM

Nucleotide


Download         Length: 411 bp        

>NTDB_id=376784 FRC90_RS02750 WP_074686761.1 587764..588174(+) (pilG) [Paracidovorax citrulli strain NWB SC107]
GTGACGAAATTGACCCAGACCAGTGGCGCAACCTTCAAGGTGCTTGTCGTGGACGACAGCAACACCATCCGCCGGAGTGC
CGAGATCTTTCTCAAGCAGGGAGGCCACGAGGTCCTGCTGGCGGACGATGGCTTCGACGCCCTGGCGAAGGTCAATGATT
ATCAACCCCAGTTGATTTTCTGCGACATCCTGATGCCGAAACTGGACGGCTACCAGACCTGCGCCATCATCAAGCGCAAT
GCGCGCTTCGCGGACACGCCCGTTGTCATGCTCTCGTCAAGAGACGGGGTATTCGACAAGGCGCGCGGCCGCATGGTGGG
CTGCCAGGAATATCTCACCAAACCATTTACCAAAGACCAGCTGCTGAAAGCGGTTCAGCAGTTCGGTAATGCCCAACAAG
GAGCGATGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(14-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

56.41

86.029

0.485

Multiple sequence alignment