Detailed information NTG0037675

Bioinformatically predicted

Overview

• Name: comF
• Type: Machinery gene
• Locus tag: AOLE_RS01675
• Genome accession: NC_014259
• Coordinates: 362077..362526 (+)
• Length: 149 a.a.
• NCBI ID: WP_013196717.1
• Uniprot ID: A0AAN0P5I4
• Organism: Acinetobacter oleivorans DR1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 357077..367526

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AOLE_RS01660 (AOLE_01615)	-	357126..357872 (+)	747	WP_013196714.1	PilX N-terminal domain-containing pilus assembly protein	-
AOLE_RS01665 (AOLE_01620)	-	357897..361583 (+)	3687	WP_013196715.1	PilC/PilY family type IV pilus protein	-
AOLE_RS01670 (AOLE_01625)	comE	361605..362093 (+)	489	WP_303621105.1	type IV pilin protein	Machinery gene
AOLE_RS01675 (AOLE_01630)	comF	362077..362526 (+)	450	WP_013196717.1	type IV pilin protein	Machinery gene
AOLE_RS01680 (AOLE_01635)	rpsP	362673..362924 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
AOLE_RS01685 (AOLE_01640)	rimM	362945..363493 (+)	549	WP_004789777.1	ribosome maturation factor RimM	-
AOLE_RS01690 (AOLE_01645)	trmD	363536..364291 (+)	756	WP_013196718.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
AOLE_RS01695 (AOLE_01650)	rplS	364511..364879 (+)	369	WP_004789772.1	50S ribosomal protein L19	-
AOLE_RS01700 (AOLE_01655)	-	364933..365874 (-)	942	WP_081399246.1	triacylglycerol lipase	-
AOLE_RS01705 (AOLE_01660)	-	365991..367022 (-)	1032	WP_013196720.1	lipase secretion chaperone	-

Sequence

Protein

• Length: 149 a.a.
• Molecular weight: 16507.71 Da
• Isoelectric Point: 8.4407

>NTDB_id=37675 AOLE_RS01675 WP_013196717.1 362077..362526(+) (comF) [Acinetobacter oleivorans DR1]
MLKNGSHQGFTLIELMIVVAIIAILAAIAYPSYTQYKIRTNRTDLQAEMLRINQRLQSYKVVNHSFNNATLDNGTASQNY
PLAGTAFYTVTLAIDADNQGYLLKATPIITSIQNGNGEVCVNQDQQRYWSKGLACSLISLSNTSNWDGR

Nucleotide

• Length: 450 bp

>NTDB_id=37675 AOLE_RS01675 WP_013196717.1 362077..362526(+) (comF) [Acinetobacter oleivorans DR1]
ATGCTGAAAAATGGTAGTCACCAAGGATTTACATTAATTGAGCTGATGATTGTGGTGGCGATCATTGCAATTCTGGCAGC
AATTGCTTACCCGTCTTATACTCAATATAAAATCCGTACTAATCGTACGGATTTACAAGCTGAGATGCTGCGTATTAATC
AACGATTACAAAGCTATAAAGTTGTTAATCATAGTTTTAATAATGCTACTTTAGATAATGGTACAGCCTCTCAAAATTAT
CCTTTAGCAGGAACTGCTTTTTATACTGTAACTTTAGCGATTGATGCTGATAACCAGGGATATTTGCTCAAAGCCACTCC
AATTATTACTTCTATACAAAATGGTAATGGTGAAGTTTGCGTAAATCAGGATCAACAGCGCTACTGGTCTAAAGGTCTAG
CCTGCTCATTAATAAGCTTGTCAAATACATCAAATTGGGATGGACGTTAA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (31-113)

• Prokaryotic N-terminal methylation motif (N_methyl) (7-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comF	Acinetobacter baylyi ADP1	61.538	95.973	0.591
pilE	Acinetobacter baumannii D1279779	47.482	93.289	0.443