Detailed information NTG0376736

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FKV26_RS10540
• Genome accession: NZ_CP042299
• Coordinates: 2343731..2344738 (-)
• Length: 335 a.a.
• NCBI ID: WP_000224452.1
• Uniprot ID: A0A085RG68
• Organism: Vibrio cholerae O1 strain AAS91
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2338731..2349738

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FKV26_RS10515 (FKV26_10800)	rraA	2339306..2339821 (-)	516	WP_000456236.1	ribonuclease E activity regulator RraA	-
FKV26_RS10520 (FKV26_10805)	-	2339896..2340813 (-)	918	WP_001066162.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FKV26_RS10525 (FKV26_10810)	hslU	2340917..2342248 (-)	1332	WP_001293366.1	HslU--HslV peptidase ATPase subunit	-
FKV26_RS10530 (FKV26_10815)	hslV	2342314..2342871 (-)	558	WP_000208249.1	ATP-dependent protease subunit HslV	-
FKV26_RS10535 (FKV26_10820)	-	2343008..2343559 (-)	552	WP_001884022.1	SPOR domain-containing protein	-
FKV26_RS10540 (FKV26_10825)	cytR	2343731..2344738 (-)	1008	WP_000224452.1	DNA-binding transcriptional regulator CytR	Regulator
FKV26_RS10545 (FKV26_10830)	priA	2345044..2347248 (-)	2205	WP_001247858.1	primosomal protein N'	-
FKV26_RS10550 (FKV26_10835)	rpmE	2347503..2347721 (+)	219	WP_000643446.1	50S ribosomal protein L31	-
FKV26_RS10555 (FKV26_10840)	-	2348029..2349306 (+)	1278	WP_001278588.1	malic enzyme-like NAD(P)-binding protein	-
FKV26_RS10560 (FKV26_10845)	metJ	2349417..2349734 (-)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37018.59 Da
• Isoelectric Point: 7.0759

>NTDB_id=376736 FKV26_RS10540 WP_000224452.1 2343731..2344738(-) (cytR) [Vibrio cholerae O1 strain AAS91]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=376736 FKV26_RS10540 WP_000224452.1 2343731..2344738(-) (cytR) [Vibrio cholerae O1 strain AAS91]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACCGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCGTCCACTCGTAAACGAGTGGAAGAGGCTGTGCTGGAAGCGGGTTACTCACCCAATTCTTTGGCGCGCAATT
TGCGCCGTAATGAATCGAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGT
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTGCTGGGGACAGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTGGAATTGCCAACGGTACACATTGATAAC
CTGACCTCGGCATTTGAGGCGGTAAACTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCAGGTCCACAACA
TGCTGCGCTGTGCCAATTCCGTCATCAAGGCTATCAACAGGCGTTGCGTCGTGCTGGCATCACCATGAACCCGACTTACT
GCACTTTTGGCGATTTCACTTTTGAAGCCGGGGCAAAGGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGTCATAACGATACGATGGCGATTGGCGCAATTCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCGCAAGATCT
CTCTGTGGTCGGTTTTGACGATATTCAGTTTGCCCAGTACTGCGATCCCCCATTAACCACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGCTGATGATGCTTGAGCTGCTTCGCGGACACGATGTACGTGCTGGATCGCGTCTTTTGGAG
ACCAAGCTGGTCGTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A085RG68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	100	100	1
cytR	Vibrio parahaemolyticus RIMD 2210633	90.719	99.701	0.904