Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | FKV26_RS10345 | Genome accession | NZ_CP042299 |
| Coordinates | 2303686..2304270 (-) | Length | 194 a.a. |
| NCBI ID | WP_000902745.1 | Uniprot ID | A0A0H6BVQ2 |
| Organism | Vibrio cholerae O1 strain AAS91 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2298686..2309270
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FKV26_RS10320 (FKV26_10600) | aroB | 2299030..2300115 (-) | 1086 | WP_000439805.1 | 3-dehydroquinate synthase | - |
| FKV26_RS10325 (FKV26_10605) | aroK | 2300143..2300667 (-) | 525 | WP_000818616.1 | shikimate kinase AroK | - |
| FKV26_RS10330 (FKV26_10610) | pilQ | 2300854..2302569 (-) | 1716 | WP_000788426.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| FKV26_RS10335 (FKV26_10615) | pilP | 2302595..2303113 (-) | 519 | WP_000792032.1 | pilus assembly protein PilP | Machinery gene |
| FKV26_RS10340 (FKV26_10620) | pilO | 2303103..2303693 (-) | 591 | WP_000157690.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FKV26_RS10345 (FKV26_10625) | pilN | 2303686..2304270 (-) | 585 | WP_000902745.1 | PilN domain-containing protein | Machinery gene |
| FKV26_RS10350 (FKV26_10630) | pilM | 2304260..2305276 (-) | 1017 | WP_000520444.1 | type IV pilus assembly protein PilM | Machinery gene |
| FKV26_RS10355 (FKV26_10635) | - | 2305424..2307901 (+) | 2478 | WP_000668743.1 | penicillin-binding protein 1A | - |
| FKV26_RS10360 (FKV26_10640) | oxyR | 2307977..2308870 (-) | 894 | WP_001025909.1 | DNA-binding transcriptional regulator OxyR | - |
Sequence
Protein
Download Length: 194 a.a. Molecular weight: 21964.42 Da Isoelectric Point: 9.9503
>NTDB_id=376734 FKV26_RS10345 WP_000902745.1 2303686..2304270(-) (pilN) [Vibrio cholerae O1 strain AAS91]
MLHKVNLLPWRDARREAHKRRFLGLVTLGVLLAVLMQFAAGEYLGGQMALQQERIGYLQQHIFSLDQQIAKLKIAEEEHK
ALLTRLTVVEQLQQKRNKTTEFMNQMPNLIPEGVYVDKIKMNGHQIEITGISDSTARLATMLDNLEKSDKLTDVEMHEIV
SGNKRFGKQFQSFKVSFQILTPASNPQAGGAHNG
MLHKVNLLPWRDARREAHKRRFLGLVTLGVLLAVLMQFAAGEYLGGQMALQQERIGYLQQHIFSLDQQIAKLKIAEEEHK
ALLTRLTVVEQLQQKRNKTTEFMNQMPNLIPEGVYVDKIKMNGHQIEITGISDSTARLATMLDNLEKSDKLTDVEMHEIV
SGNKRFGKQFQSFKVSFQILTPASNPQAGGAHNG
Nucleotide
Download Length: 585 bp
>NTDB_id=376734 FKV26_RS10345 WP_000902745.1 2303686..2304270(-) (pilN) [Vibrio cholerae O1 strain AAS91]
ATGTTGCATAAGGTCAACTTACTGCCGTGGCGTGATGCACGGCGTGAAGCACATAAGCGGCGCTTTTTGGGGTTAGTGAC
ACTCGGTGTTTTGCTGGCGGTGTTGATGCAATTTGCAGCAGGCGAATACTTGGGCGGACAAATGGCTTTGCAACAAGAGC
GGATTGGTTATTTGCAACAACATATCTTCTCGCTGGATCAGCAGATCGCTAAGTTGAAGATCGCTGAAGAAGAACATAAG
GCGTTATTGACCCGTTTGACTGTGGTGGAGCAACTGCAGCAAAAGCGCAATAAAACGACTGAGTTTATGAACCAAATGCC
CAACCTGATCCCTGAAGGCGTCTATGTCGACAAGATCAAGATGAATGGCCATCAGATAGAAATAACCGGGATTAGCGATT
CCACCGCTCGCTTGGCAACCATGCTCGATAACTTGGAGAAGTCGGACAAATTAACCGATGTTGAAATGCATGAAATCGTT
TCAGGGAATAAGCGATTTGGTAAGCAATTTCAGAGCTTTAAAGTCTCCTTCCAAATTTTAACCCCAGCCTCTAACCCGCA
AGCGGGAGGTGCACACAATGGCTAG
ATGTTGCATAAGGTCAACTTACTGCCGTGGCGTGATGCACGGCGTGAAGCACATAAGCGGCGCTTTTTGGGGTTAGTGAC
ACTCGGTGTTTTGCTGGCGGTGTTGATGCAATTTGCAGCAGGCGAATACTTGGGCGGACAAATGGCTTTGCAACAAGAGC
GGATTGGTTATTTGCAACAACATATCTTCTCGCTGGATCAGCAGATCGCTAAGTTGAAGATCGCTGAAGAAGAACATAAG
GCGTTATTGACCCGTTTGACTGTGGTGGAGCAACTGCAGCAAAAGCGCAATAAAACGACTGAGTTTATGAACCAAATGCC
CAACCTGATCCCTGAAGGCGTCTATGTCGACAAGATCAAGATGAATGGCCATCAGATAGAAATAACCGGGATTAGCGATT
CCACCGCTCGCTTGGCAACCATGCTCGATAACTTGGAGAAGTCGGACAAATTAACCGATGTTGAAATGCATGAAATCGTT
TCAGGGAATAAGCGATTTGGTAAGCAATTTCAGAGCTTTAAAGTCTCCTTCCAAATTTTAACCCCAGCCTCTAACCCGCA
AGCGGGAGGTGCACACAATGGCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Vibrio cholerae strain A1552 |
100 |
100 |
1 |
| pilN | Vibrio campbellii strain DS40M4 |
60.452 |
91.237 |
0.552 |