Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   FPV14_RS10225 Genome accession   NZ_CP042286
Coordinates   2130134..2131177 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus argenteus strain B3-25B     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2125134..2136177
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPV14_RS10195 (FPV14_10195) - 2125545..2126792 (-) 1248 WP_047557219.1 aminopeptidase -
  FPV14_RS10200 (FPV14_10200) - 2126804..2127004 (-) 201 WP_000180459.1 DUF1128 family protein -
  FPV14_RS10205 (FPV14_10205) - 2127151..2127615 (+) 465 WP_000228669.1 low molecular weight protein-tyrosine-phosphatase -
  FPV14_RS10210 (FPV14_10210) - 2127622..2127897 (+) 276 WP_047557221.1 YtxH domain-containing protein -
  FPV14_RS10215 (FPV14_10215) - 2128176..2129399 (+) 1224 WP_047557224.1 YihY/virulence factor BrkB family protein -
  FPV14_RS10220 (FPV14_10220) vraR 2129515..2130144 (-) 630 WP_000153529.1 two-component system response regulator VraR Regulator
  FPV14_RS10225 (FPV14_10225) vraS 2130134..2131177 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  FPV14_RS10230 (FPV14_10230) liaF 2131174..2131875 (-) 702 WP_000149061.1 cell wall-active antibiotics response protein LiaF -
  FPV14_RS10235 (FPV14_10235) - 2131890..2132276 (-) 387 WP_001110170.1 hypothetical protein -
  FPV14_RS10240 (FPV14_10240) map 2132497..2133255 (-) 759 WP_031788218.1 type I methionyl aminopeptidase -
  FPV14_RS10245 (FPV14_10245) - 2133779..2134765 (+) 987 WP_047557232.1 aromatic acid exporter family protein -
  FPV14_RS10250 (FPV14_10250) - 2135167..2135547 (-) 381 WP_225995457.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=376639 FPV14_RS10225 WP_001017131.1 2130134..2131177(-) (vraS) [Staphylococcus argenteus strain B3-25B]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=376639 FPV14_RS10225 WP_001017131.1 2130134..2131177(-) (vraS) [Staphylococcus argenteus strain B3-25B]
ATGAACCATTATATTAGAACAATTGGTTCGATGCTCATCTTAGTATACAGCATGCTAGCGGCATTTCTTTTTATAGATAA
AGTTTTCGTTAATATTATTTATTTTCAAGGCATGTTTTATACACAAATATTTGGGATTCCAGTCTTTTTATTTTTAAATC
TCATTATCATTTTATTGTGTATCATCGTCGGATCGGTGCTTGCCTACAAAATTAATCAACAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCTATGGAAGGCGAAACAGTAGGTATCAATGATCAAAATATAGAAATATATAGTGAAACATTAGATTT
ATATCATACGTTAGTACCTTTAAATCAAGAATTGCATAAGTTAAGACTCAAAACGCAAAATTTAACAAATGAAAATTACA
ATATTAATGATGTTAAAGTTAAAAAGATTATCGAAGATGAAAGACAACGTTTAGCTAGAGAACTACACGACTCTGTTAGT
CAACAACTTTTTGCGGCAAGTATGATGTTATCTGCAATTAAAGAAACGAAATTAGAACCACCTTTAGATCAACAAATACC
TATTTTAGAGAAAATGGTTCAAGATTCTCAGTTAGAAATGCGTGCTCTGCTGTTACACTTAAGACCACTCGGCTTGAAAG
ATAAGTCGTTAGGCGAAGGTATTAAAGATTTAGTTATTGATTTACAAAAGAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCGAAAGGTATTGAGGATCATTTATTTAGAATTACGCAAGAAGCAATATCTAATACATTGAGACA
TTCAAATGGTACGAAAGTAACTGTAGAATTATTTAATAAAGATGATTATTTATTGTTAAGGATACAAGATAATGGTAAAG
GTTTTAATGTAGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCACTACCAGATTCAGGTACACGTATTGAGGTGAAAGCACCTCTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment