Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | FQZ25_RS06550 | Genome accession | NZ_CP042270 |
| Coordinates | 1244210..1244494 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843036.1 | Uniprot ID | A0A9W5VII1 |
| Organism | Bacillus thuringiensis strain GA-A07 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1239210..1249494
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FQZ25_RS06515 (FQZ25_06520) | tmk | 1239402..1240028 (+) | 627 | WP_000677221.1 | dTMP kinase | - |
| FQZ25_RS06520 (FQZ25_06525) | holB | 1240064..1241047 (+) | 984 | WP_000169561.1 | DNA polymerase III subunit delta' | - |
| FQZ25_RS06525 (FQZ25_06530) | - | 1241053..1241880 (+) | 828 | WP_152305107.1 | stage 0 sporulation family protein | - |
| FQZ25_RS06530 (FQZ25_06535) | yabA | 1241895..1242245 (+) | 351 | WP_152305108.1 | DNA replication initiation control protein YabA | - |
| FQZ25_RS06535 (FQZ25_06540) | - | 1242328..1243068 (+) | 741 | WP_001055366.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| FQZ25_RS06540 (FQZ25_06545) | - | 1243055..1243345 (+) | 291 | WP_000414350.1 | GIY-YIG nuclease family protein | - |
| FQZ25_RS06545 (FQZ25_06550) | rsmI | 1243314..1244189 (+) | 876 | WP_152305109.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| FQZ25_RS06550 (FQZ25_06555) | abrB | 1244210..1244494 (-) | 285 | WP_000843036.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| FQZ25_RS06555 (FQZ25_06560) | metG | 1244980..1246962 (+) | 1983 | WP_000134132.1 | methionine--tRNA ligase | - |
| FQZ25_RS06560 (FQZ25_06565) | - | 1247129..1247896 (+) | 768 | WP_000895851.1 | TatD family hydrolase | - |
| FQZ25_RS06565 (FQZ25_06570) | rnmV | 1248111..1248668 (+) | 558 | WP_000692835.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10490.17 Da Isoelectric Point: 4.7174
>NTDB_id=376473 FQZ25_RS06550 WP_000843036.1 1244210..1244494(-) (abrB) [Bacillus thuringiensis strain GA-A07]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=376473 FQZ25_RS06550 WP_000843036.1 1244210..1244494(-) (abrB) [Bacillus thuringiensis strain GA-A07]
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGACGCTCTTGAAATCTATGTTGATGACGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGACGGTAACCTTTCTTTAGCTGAAGGTAAAATCATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGACGCTCTTGAAATCTATGTTGATGACGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGACGGTAACCTTTCTTTAGCTGAAGGTAAAATCATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
85.106 |
100 |
0.851 |